AT2G25760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.809 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G13670.1); Has 17667 Blast hits to 17599 proteins in 1508 species: Archae - 20; Bacteria - 6581; Metazoa - 4779; Fungi - 1455; Plants - 2098; Viruses - 217; Other Eukaryotes - 2517 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10985118..10988652 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76185.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.31 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||||||||||||||||||
| Length | 673 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPELRSNARR DRDKKNPKQN PIALKQSPVR RNPRRQLKKK VVVKEAIVAA EKTTPLVKEE EEQIRVSSED KKMDENDSGG QAAPVPDDEG NAPPLPEKVQ 101: VGNSPMYKLD RKLGKGGFGQ VYVGRKMGTS TSNARFGPGA LEVALKFEHR TSKGCNYGPP YEWQVYNALG GSHGVPRVHF KGRQGDFYVM VMDILGPSLW 201: DVWNSTTQAM STEMVACIAI EAISILEKMH SRGYVHGDVK PENFLLGPPG TPEEKKLFLV DLGLASKWRD TATGLHVEYD QRPDVFRGTV RYASVHAHLG 301: RTCSRRDDLE SLAYTLVFLL RGRLPWQGYQ GENKGFLVCK KKMATSPETL CCFCPQPFRQ FVEYVVNLKF DEEPDYAKYV SLFDGIVGPN PDIRPINTEG 401: AQKLIHQVGQ KRGRLTMDEE DEQPTKKIRL GMPATQWISI YSAHRPMKQR YHYNVTDTRL AQHIEKGNED GLFISSVASC TDLWALIMDA GSGFTDQVYQ 501: LSPSFLHKEW IMEQWEKNYY ITAVAGANSG NSFVVMSKGT QYLQQSYKVS DSFPFKWINK KWREGFYVTS MATAGSKWGI VMSRGASFSD QVIELDFLYP 601: SEGIHRRWEN GYRITSVAAT WDQAAFVLSV PRRKLTDETQ ETLRTSAFPS NHVKEKWGKN LYIASICYGR TVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)