AT2G25740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP-dependent protease La (LON) domain protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 2345 Blast hits to 2258 proteins in 710 species: Archae - 0; Bacteria - 1319; Metazoa - 281; Fungi - 6; Plants - 99; Viruses - 0; Other Eukaryotes - 640 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:10980175..10983632 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62053.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.00 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||||||
| Length | 547 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDDERIRERE RLQIEQIREL DFEELQVEEV DDLHDSDSDD NNDDLSSFPF SSHAQASGNL GDDELMFNPA LASLHMYLGE VEDTQNRVSF VDGGTVLKIP 101: LFYLEGVVLF PEATLPLRII QPSFLAAVER ALNQANAPST IGVIRVYREG AQFKYASVGT TAEIRQYRRL GDGSFNVITR GQQRFRLKHR WTDVEGFTCG 201: EVQIVDEDVP LRTPRDAFGK LVPLSKLRGR YPLGTASLST PLRDMDAQSE ANSEESFESA LSPSEKRLHY SVVDSIFCNS TSSDDDQVVS TSTVQSSGSN 301: PYSLRSIGCL ASSHDNENED EQSAIGKTPV SQEKYQKQNR LASFRQNTDL SRFRMTPRAF WPFWAYRMFD SYYLAQRAVD LWKQIVGVPN MEAFVNKPDI 401: LSFSIASKIP VSESIRQELL ELDGVSYRLQ REIELLESFD RVRCIHCQTV IARRKDMLVM SNEGPLGAYV NPHGYVHEIM TFYKANDIAL RGRPVKKDSW 501: FPGYAWTIAN CATCETQLGW HFTATNKKLK PSSFWAVRGS QVADDMR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)