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AT2G25625.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J7GWeggNOG:ENOG410ZHN4EMBL:AC006053EMBL:AK227210
EMBL:AY088242EMBL:CP002685EnsemblPlants:AT2G25625EnsemblPlants:AT2G25625.1
entrez:817103ExpressionAtlas:Q8S8K8GeneID:817103Gramene:AT2G25625.1
hmmpanther:PTHR37210hmmpanther:PTHR37210:SF2HOGENOM:HOG000090661KEGG:ath:AT2G25625
OMA:GRISCCLPhylomeDB:Q8S8K8Proteomes:UP000006548RefSeq:NP_850063.1
STRING:3702.AT2G25625.1TAIR:AT2G25625UniGene:At.19162UniProt:Q8S8K8
Coordinates (TAIR10) chr2:+:10906562..10907099
Molecular Weight (calculated) 16218.70 Da
IEP (calculated) 8.89
GRAVY (calculated) -0.08
Length 152 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGRISCCLN LPPLDSNSAQ SLASLLKTTS KISCRRTENE TEPRKNKCSF VLGVAATVVI GGIQINDVAS VEAAVVKSPV EEMAAGVVPP RRWSDKRTCP
101: PWLENSLETI VPENLPRPSA HRRLELAGLA KGDAPPVGVV MTRVNRGGCF SV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)