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AT2G25430.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:23323832 (2013): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18433157 (2008): nucleus
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: clathrin coat assembly; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G32285.2); Has 1786 Blast hits to 1328 proteins in 221 species: Archae - 4; Bacteria - 135; Metazoa - 673; Fungi - 126; Plants - 678; Viruses - 2; Other Eukaryotes - 168 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ90eggNOG:KOG0251EMBL:AC006300EMBL:AY085092EMBL:AY139760EMBL:BT008299EMBL:CP002685
EnsemblPlants:AT2G25430EnsemblPlants:AT2G25430.1entrez:817081Gene3D:1.20.58.150Gene3D:1.25.40.90GeneID:817081Genevisible:Q8LF20
GO:GO:0005545GO:GO:0005634GO:GO:0005794GO:GO:0005886GO:GO:0005905GO:GO:0006897GO:GO:0030136
GO:GO:0048268Gramene:AT2G25430.1hmmpanther:PTHR22951hmmpanther:PTHR22951:SF13HOGENOM:HOG000238534InParanoid:Q8LF20InterPro:IPR008942
InterPro:IPR011417InterPro:IPR013809InterPro:IPR014712iPTMnet:Q8LF20KEGG:ath:AT2G25430OMA:FYNWCKEPaxDb:Q8LF20
Pfam:PF07651Pfam:Q8LF20Pfscan:PS50942PhylomeDB:Q8LF20PIR:C84648PRIDE:Q8LF20PRO:PR:Q8LF20
PROSITE:PS50942ProteinModelPortal:Q8LF20Proteomes:UP000006548RefSeq:NP_565595.1SMART:SM00273SMR:Q8LF20STRING:3702.AT2G25430.1
SUPFAM:SSF48464SUPFAM:SSF89009TAIR:AT2G25430UniGene:At.20747UniProt:Q8LF20
Coordinates (TAIR10) chr2:+:10822716..10824677
Molecular Weight (calculated) 72088.00 Da
IEP (calculated) 5.07
GRAVY (calculated) -0.58
Length 653 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD
101: PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
201: GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
301: ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
401: EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
501: TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
601: SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)