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AT2G25355.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.992
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : PNAS-3 related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PNAS-3 related; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: PNAS-3 related (TAIR:AT4G32175.1); Has 410 Blast hits to 410 proteins in 205 species: Archae - 27; Bacteria - 0; Metazoa - 113; Fungi - 136; Plants - 59; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Protein Annotations
DNASU:817074eggNOG:COG1097eggNOG:KOG1004EMBL:AC006300EMBL:AC007070EMBL:AY045654EMBL:BT000534
EMBL:CP002685EnsemblPlants:AT2G25355EnsemblPlants:AT2G25355.1entrez:817074ExpressionAtlas:Q94AW9GeneID:817074GO:GO:0000178
GO:GO:0003723Gramene:AT2G25355.1hmmpanther:PTHR21321HOGENOM:HOG000184644IntAct:Q94AW9InterPro:IPR004088InterPro:IPR012340
InterPro:IPR026699OMA:IWISASTPANTHER:PTHR21321Pfam:PF15985PhylomeDB:Q94AW9Proteomes:UP000006548Reactome:R-ATH-429958
Reactome:R-ATH-450604RefSeq:NP_565592.1SMR:Q94AW9STRING:3702.AT2G25355.1SUPFAM:SSF110324SUPFAM:SSF50249SUPFAM:SSF54791
TAIR:AT2G25355UniGene:At.13764UniProt:Q94AW9
Coordinates (TAIR10) chr2:+:10801391..10803591
Molecular Weight (calculated) 26481.10 Da
IEP (calculated) 8.31
GRAVY (calculated) -0.12
Length 241 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTEVSTSPT SLIDQTVVPG DVVLDLSNMT NQTIKLGSGL RQDNEVISVM RAGKLRYSKP NKYWVESSHK RYVPRPEDHV LGIVVDCKGE NYWIDIKGPQ
101: LALLPVLAFE GANRRNYPKF EVSTLLYTRV VKTNTGMNPE LSCVDESGKA AGFGPLKDGF MFETSTGLSR MLLSSPTCPV LEALGKKLSF ETAFGLNGRC
201: WVHAAAPRIV IIVANALMNS ETLSGTQQRI MVEKLLEKIS D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)