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AT2G25010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Aminotransferase-like, plant mobile domain family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Aminotransferase-like, plant mobile domain family protein; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G17930.1); Has 746 Blast hits to 715 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 746; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G25010-MONOMEReggNOG:ENOG410IVA8eggNOG:ENOG410YC97EMBL:AC006585
EMBL:BT025335EMBL:CP002685EnsemblPlants:AT2G25010EnsemblPlants:AT2G25010.1
entrez:817040GeneID:817040GO:GO:0005634GO:GO:0008483
GO:GO:0010073GO:GO:0010082Gramene:AT2G25010.1hmmpanther:PTHR31973
InterPro:IPR019557KEGG:ath:AT2G25010OMA:WYARISIPfam:PF10536
PhylomeDB:Q9SK32PIR:B84643Proteomes:UP000006548RefSeq:NP_565582.1
TAIR:AT2G25010UniGene:At.39075UniProt:Q9SK32
Coordinates (TAIR10) chr2:+:10631691..10633547
Molecular Weight (calculated) 57483.70 Da
IEP (calculated) 6.05
GRAVY (calculated) -0.36
Length 509 amino acids
Sequence (TAIR10)
(BLAST)
001: MDIDVGPVDP SVLYEQDLHV SSAVWEGQER GLLRCQEHTS LLHQWKLTDE QINLVDKAGF GYFRKIGPMS LNNSLISALV ERWRRETNTF HLPLGEMTIT
101: LDEVALVLGL EIDGDPIVGS KVGDEVAMDM CGRLLGKLPS AANKEVNCSR VKLNWLKRTF SECPEDASFD VVKCHTRAYL LYLIGSTIFA TTDGDKVSVK
201: YLPLFEDFDQ AGRYAWGAAA LACLYRALGN ASLKSQSNIC GCLTLLQCWS YFHLDIGRPE KSEACFPLAL LWKGKGSRSK TDLSEYRREL DDLDPSKITW
301: CPYERFENLI PPHIKAKLIL GRSKTTLVCF EKIELHFPDR CLRQFGKRQP IPLKVKRRDR KNRRLDDLDT SMSLACEEWA ERGDHIVDSP GGGNVVDDGA
401: YMEWYARISI TKLYREAFLE SQVMNMIACM REFEEAASGI ALERLSPAER EVMESVKDTF ANSLTFGGWQ EVAVNSGYGK RRRRNEHTPT PNNGGGNDIS
501: SLLLQKEDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)