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AT2G24765.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ADP-ribosylation factor 3
Curator
Summary (TAIR10)
GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner
Computational
Description (TAIR10)
ADP-ribosylation factor 3 (ARF3); FUNCTIONS IN: protein binding; INVOLVED IN: response to cadmium ion, N-terminal protein myristoylation; LOCATED IN: Golgi stack, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1B (TAIR:AT5G14670.1); Has 11503 Blast hits to 11498 proteins in 430 species: Archae - 12; Bacteria - 8; Metazoa - 5738; Fungi - 1713; Plants - 1591; Viruses - 3; Other Eukaryotes - 2438 (source: NCBI BLink).
Protein Annotations
BioGrid:2366eggNOG:COG1100eggNOG:KOG0070EMBL:AC006585EMBL:AC007266EMBL:AK117735EMBL:AY063840
EMBL:AY150410EMBL:CP002685EMBL:X77385EMBL:Z25549EMBL:Z25825EnsemblPlants:AT2G24765EnsemblPlants:AT2G24765.1
entrez:817014Gene3D:3.40.50.300GeneID:817014Genevisible:P40940GO:GO:0005525GO:GO:0005795GO:GO:0005886
GO:GO:0007264GO:GO:0015031GO:GO:0016020GO:GO:0016192GO:GO:0046686hmmpanther:PTHR11711HOGENOM:HOG000163691
IntAct:P40940InterPro:IPR005225InterPro:IPR006689InterPro:IPR024156InterPro:IPR027417KEGG:ath:AT2G24765KO:K07942
OMA:DMEGCMSPaxDb:P40940Pfam:P40940Pfam:PF00025Pfscan:PS51417PhylomeDB:P40940PIR:S41938
PRIDE:P40940PRINTS:PR00328PRO:PR:P40940PROSITE:PS51417ProteinModelPortal:P40940Proteomes:UP000006548RefSeq:NP_001077955.1
RefSeq:NP_850057.1SMR:P40940STRING:3702.AT2G24765.1SUPFAM:SSF52540TAIR:AT2G24765tair10-symbols:ARF3tair10-symbols:ARL1
tair10-symbols:ATARL1TIGRfam:TIGR00231TIGRFAMs:TIGR00231UniGene:At.166UniProt:P40940
Coordinates (TAIR10) chr2:+:10562822..10564961
Molecular Weight (calculated) 20243.30 Da
IEP (calculated) 5.01
GRAVY (calculated) 0.01
Length 182 amino acids
Sequence (TAIR10)
(BLAST)
001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)