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AT2G24693.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : Protein of unknown function (PD694200)
Curator
Summary (TAIR10)
Encodes a defensin-like (DEFL) family protein.
Computational
Description (TAIR10)
Protein of unknown function (PD694200); BEST Arabidopsis thaliana protein match is: Protein of unknown function (PD694200) (TAIR:AT5G55131.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioGrid:30165EMBL:AC007266EMBL:BT026394EMBL:CP002685
EnsemblPlants:AT2G24693EnsemblPlants:AT2G24693.1entrez:2745555GeneID:2745555
GO:GO:0005576GO:GO:0031640GO:GO:0050832Gramene:AT2G24693.1
HOGENOM:HOG000113302IntAct:Q3E7S1KEGG:ath:AT2G24693OMA:GAKECNA
PaxDb:Q3E7S1Pfam:Q3E7S1Proteomes:UP000006548RefSeq:NP_973529.1
TAIR:AT2G24693TMHMM:TMhelixUniGene:At.49544UniProt:Q3E7S1
Coordinates (TAIR10) chr2:+:10506319..10506750
Molecular Weight (calculated) 7858.94 Da
IEP (calculated) 8.71
GRAVY (calculated) 0.48
Length 73 amino acids
Sequence (TAIR10)
(BLAST)
1: MTTKKTSSVV LPLLLVFALI LMPMVAGQLK STCRIAEAWK GAKECNAKCA ALGTTRGGVC QKFLGDLYCC CWD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)