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AT2G24610.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.830
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cyclic nucleotide-gated channel 14
Curator
Summary (TAIR10)
member of Cyclic nucleotide gated channel family
Computational
Description (TAIR10)
cyclic nucleotide-gated channel 14 (CNGC14); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 17 (TAIR:AT4G30360.1); Has 3394 Blast hits to 3208 proteins in 282 species: Archae - 0; Bacteria - 121; Metazoa - 1626; Fungi - 28; Plants - 945; Viruses - 0; Other Eukaryotes - 674 (source: NCBI BLink).
Protein Annotations
BioGrid:2349eggNOG:ENOG410XPSEeggNOG:KOG0498EMBL:AC006954EMBL:AK228122EMBL:CP002685EnsemblPlants:AT2G24610
EnsemblPlants:AT2G24610.1entrez:816997Gene3D:2.60.120.10GeneID:816997Genevisible:Q9SJA4GO:GO:0005249GO:GO:0005886
GO:GO:0016021GO:GO:0030552GO:GO:0030553GO:GO:0042391GO:GO:0071805Gramene:AT2G24610.1hmmpanther:PTHR10217
hmmpanther:PTHR10217:SF544HOGENOM:HOG000238338InParanoid:Q9SJA4InterPro:IPR000595InterPro:IPR003938InterPro:IPR005821InterPro:IPR014710
InterPro:IPR018490iPTMnet:Q9SJA4KEGG:ath:AT2G24610KO:K05391OMA:QIIIKFRPaxDb:Q9SJA4Pfam:PF00027
Pfam:PF00520Pfam:Q9SJA4Pfscan:PS50042PhylomeDB:Q9SJA4PIR:G84638PRIDE:Q9SJA4PRINTS:PR01463
PRO:PR:Q9SJA4PROSITE:PS50042ProteinModelPortal:Q9SJA4Proteomes:UP000006548Reactome:R-ATH-2485179Reactome:R-ATH-2514859Reactome:R-ATH-5620916
RefSeq:NP_850056.1SMART:SM00100SMR:Q9SJA4STRING:3702.AT2G24610.1SUPFAM:SSF51206SUPFAM:SSF81324TAIR:AT2G24610
tair10-symbols:ATCNGC14tair10-symbols:CNGC14TMHMM:TMhelixUniGene:At.39132UniProt:Q9SJA4
Coordinates (TAIR10) chr2:+:10457105..10460351
Molecular Weight (calculated) 83459.00 Da
IEP (calculated) 9.46
GRAVY (calculated) -0.11
Length 726 amino acids
Sequence (TAIR10)
(BLAST)
001: MEFKRDNTVR FYGDEKQTIE VGEKRVPLFK STTAPFMKQE VLPKKSKTRL KIPRFGRFKV FPENFEIERD KILDPGGDAV LQWNRVFLFW CLVALYVDPL
101: FFFLSSVKRI GRSSCMTTDL KLGIVITFFR TLADLFYVLH IVIKFRTAYV SRTSRVFGRG ELVKDPKLIA RRYLRSDFIV DLIACLPLPQ IVSWFILPSI
201: RSSHSDHTTN ALVLIVLVQY IPRLYLIFPL SAEIIKATGV VTTTAWAGAA YNLLQYMLAS HILGSAWYLL SIERQATCWK AECHKESVPL QCVTDFFDCG
301: TLHRDDRNNW QNTTVVFSNC DPSNNIQFTF GIFADALTKN VVSSPFLEKY LYCLWFGLQN LSSYGQNLST STSVLETMFA ILVAIFGLVL FALLIGNMQT
401: YLQSITVRLE EWRLKRRDTE EWMGHRLLPQ NLRERVRRFV QYKWLATRGV DEETILHSLP ADLRRDIQRH LCLDLVRRVP LFAQMDDQLL DAICERLASS
501: LSTQGNYIVR EGDPVTEMLF IIRGKLESST TNGGRTGFFN SITLRPGDFC GEELLAWALL PKSTVNLPSS TRTVRALEEV EAFALQAGDL KFVANQFRRL
601: HSKKLQHTFR YYSHQWRTWA ACFVQVAWRR YKRKKLAKSL SLAESFSSYD EEEAVAVAAT EEMSHEGEAQ SGAKARHHTS NVKPHFAATI LASRFAKNTR
701: RTAHKLKDVE IPMLPKPDEP DFSVDD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)