AT2G24310.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.989 What is SUBAcon? |
|
||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47170.1); Has 9168 Blast hits to 2316 proteins in 376 species: Archae - 2; Bacteria - 1905; Metazoa - 1700; Fungi - 1409; Plants - 76; Viruses - 48; Other Eukaryotes - 4028 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:10344361..10345329 | ||||||||||||||||||||
| Molecular Weight (calculated) | 33806.90 Da | ||||||||||||||||||||
| IEP (calculated) | 4.79 | ||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||
| Length | 322 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAENVGSDSS EFESISSSQK SYLKNCPFAG HEALPTKSTD SDNTEVLGNQ ISPAVVKTPI LSFSSPTSLD SINDDVFRTP PENASLSSAA ESEPRVGVSE 101: IKLQGGSNLT TPFSMAETTL VSSSPSLPAE NVRVSESNLK SSSSTAKTTP VSASPSVNAR VSESNLNSSS STTPVSVSPS EKVRVFETTP VSASPSEKVR 201: VFETKCHSDS GDSVPLSSSP PSVAADDVRV PAKHLDSDSS PPTAIGRTMV LVKQRISASD NSASSSASEG TKVSKTENSG EVLPFKEIIE ALLRNSGEKL 301: NERDDKVSYV EILKQCGLKF PK |
||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)