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AT2G24300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calmodulin-binding protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G31000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVQGeggNOG:ENOG41114MQEMBL:AC006403EMBL:BT011245
EMBL:BT012547EMBL:CP002685EnsemblPlants:AT2G24300EnsemblPlants:AT2G24300.1
EnsemblPlants:AT2G24300.2entrez:816966ExpressionAtlas:F4IPM3GeneID:816966
Genevisible:F4IPM3GO:GO:0003677GO:GO:0005634GO:GO:0006351
GO:GO:0006355GO:GO:0006950hmmpanther:PTHR31713hmmpanther:PTHR31713:SF11
HOGENOM:HOG000237471InParanoid:F4IPM3InterPro:IPR012416KEGG:ath:AT2G24300
OMA:HIYELRGPaxDb:F4IPM3Pfam:PF07887PhylomeDB:F4IPM3
PIR:A84635PRIDE:F4IPM3PRO:PR:F4IPM3Proteomes:UP000006548
RefSeq:NP_180007.2RefSeq:NP_973527.1TAIR:AT2G24300UniGene:At.43814
UniProt:F4IPM4
Coordinates (TAIR10) chr2:+:10341431..10343457
Molecular Weight (calculated) 62688.10 Da
IEP (calculated) 7.28
GRAVY (calculated) -0.63
Length 552 amino acids
Sequence (TAIR10)
(BLAST)
001: MVWTNTQVSE EVERALSRLG NAKLTSRSPE PKRIQDRNGR NLQLHFRTRM PPHLFTGGKV EGERGSAIHV VLIDANTGNV VQTGEESASK LNVVVLEGDF
101: NDEDDEDWTR EHFESFEVKE REGKRPILTG DTQIVLKEGV GTLGELTFTD NSSWIRSRKF RLGVKPASGY GDSFCIREAK TEPFAVKDHR GELYKKHYPP
201: AVHDEVWRLD RIAKDGVLHK KLLKANIVTV EDFLRLLVKD PQKLRNLLGS GMSNRMWENT VEHAKTCVLG GKLYVFYTDQ THATGVVFNH IYEFRGLITN
301: GQFLSLESLN HDQKISADIL VKLAYENWHK AIEYDGKLLN CLPVAEKEIK SLLEPKMVSA QTAPNHQQLH NQNNRQTVQG HQNAITYSPV PQPIDYPQFA
401: QQHCNQLLPS FPCNVQDYNR SMESSNDSSS YNGEDWCPPR AAGQGLEDIF SEEIRLRSSE MLETDDMQRL LKTFGIGVNT VGTQGGFGQT DESCYGYSIP
501: YQAQIDNTYR RERNRGSGKA VVGWLKLKAA LRWGIFIRKK AAERRPQIVE ID
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)