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AT2G24200.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:18998720 (2009): extracellular region
  • PMID:15574830 (2004): plasma membrane
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Cytosol aminopeptidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30920.1); Has 9835 Blast hits to 9833 proteins in 2023 species: Archae - 18; Bacteria - 5432; Metazoa - 659; Fungi - 36; Plants - 122; Viruses - 1; Other Eukaryotes - 3567 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G24200-MONOMERBioCyc:ARA:GQT-1276-MONOMERBioCyc:ARA:GQT-1634-MONOMERBioGrid:2306EC:3.4.11.1EC:3.4.11.5eggNOG:COG0260
eggNOG:KOG2597EMBL:AC005967EMBL:AY062105EMBL:BT006345EMBL:CP002685EMBL:X63444EnsemblPlants:AT2G24200
EnsemblPlants:AT2G24200.1EnsemblPlants:AT2G24200.2entrez:816954ExpressionAtlas:P30184GeneID:816954Genevisible:P30184GO:GO:0004177
GO:GO:0005773GO:GO:0005829GO:GO:0008235GO:GO:0009570GO:GO:0030145GO:GO:0046686HAMAP:MF_00181
hmmpanther:PTHR11963hmmpanther:PTHR11963:SF17HOGENOM:HOG000243129InParanoid:P30184InterPro:IPR000819InterPro:IPR008283InterPro:IPR011356
InterPro:IPR023042KEGG:ath:AT2G24200KO:K01255MEROPS:M17.A03OMA:DGNSKFEPaxDb:P30184Pfam:P30184
Pfam:PF00883Pfam:PF02789PhylomeDB:P30184PIR:S22399PRIDE:P30184PRINTS:PR00481PRO:PR:P30184
PROSITE:PS00631ProteinModelPortal:P30184Proteomes:UP000006548RefSeq:NP_001118375.1RefSeq:NP_179997.1scanprosite:PS00631SMR:P30184
STRING:3702.AT2G24200.1SUPFAM:SSF52949SUPFAM:SSF53187TAIR:AT2G24200UniGene:At.24655UniProt:P30184
Coordinates (TAIR10) chr2:-:10287017..10289450
Molecular Weight (calculated) 54512.40 Da
IEP (calculated) 5.72
GRAVY (calculated) 0.04
Length 520 amino acids
Sequence (TAIR10)
(BLAST)
001: MAHTLGLTQP NSTEPHKISF TAKEIDVIEW KGDILVVGVT EKDLAKDGNS KFENPILSKV DAHLSGLLAQ VSSEEDFTGK PGQSTVLRLP GLGSKRIALI
101: GLGQSVSSPV AFHSLGEAVA TVSKASQSTS AAIVLASSVS DESKLSSVSA LASGIVLGLF EDGRYKSESK KPSLKAVDII GFGTGAEVEK KLKYAEDVSY
201: GVIFGRELIN SPANVLTPAV LAEEAAKVAS TYSDVFTANI LNEEQCKELK MGSYLAVAAA SANPPHFIHL VYKPPNGSVK TKLALVGKGL TFDSGGYNIK
301: TGPGCSIELM KFDMGGSAAV LGAAKAIGEI KPPGVEVHFI VAACENMISG TGMRPGDVIT ASNGKTIEVN NTDAEGRLTL ADALVYACNQ GVDKIVDLAT
401: LTGACVIALG TSMAGIYTPS DELAKEVIAA SERSGEKLWR MPLEESYWEM MKSGVADMVN TGGRAGGSIT AALFLKQFVS EKVQWMHIDM AGPVWNEKKK
501: SGTGFGVATL VEWVQKNSSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)