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AT2G23990.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : early nodulin-like protein 11
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
early nodulin-like protein 11 (ENODL11); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: central cell, embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 12 (TAIR:AT4G30590.1); Has 4552 Blast hits to 3228 proteins in 390 species: Archae - 20; Bacteria - 691; Metazoa - 248; Fungi - 307; Plants - 2397; Viruses - 386; Other Eukaryotes - 503 (source: NCBI BLink).
Protein Annotations
EMBL:AC005170EMBL:CP002685EnsemblPlants:AT2G23990EnsemblPlants:AT2G23990.1
entrez:816933ExpressionAtlas:O82227Gene3D:2.60.40.420GeneID:816933
GO:GO:0009055GO:GO:0016021Gramene:AT2G23990.1hmmpanther:PTHR33021
hmmpanther:PTHR33021:SF48HOGENOM:HOG000237627InterPro:IPR003245InterPro:IPR008972
KEGG:ath:AT2G23990Pfam:PF02298Pfscan:PS51485PhylomeDB:O82227
PIR:C84631ProDom:PD003122PROSITE:PS51485Proteomes:UP000006548
RefSeq:NP_179977.1SMR:O82227SUPFAM:SSF49503TAIR:AT2G23990
tair10-symbols:AtENODL11tair10-symbols:ENODL11TMHMM:TMhelixUniGene:At.52886
UniProt:O82227
Coordinates (TAIR10) chr2:-:10206835..10207911
Molecular Weight (calculated) 21804.00 Da
IEP (calculated) 8.66
GRAVY (calculated) 0.00
Length 207 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSLISIVSV VFLLFTTFYH FGEARIINVG GSLDAWKVPE SPNHSLNHWA ESVRFQVGDA LLFKYDSKID SVLQVTKENY EKCNTQKPLE EHKDGYTTVK
101: LDVSGPYYFI SGAPSGNCAK GEKVTVVVQS PNHPKPGPAA VTPTLPPKPS TTPAAPAPAP PTPSPKSSTS TMAPAPAPAK SSAVGLVAGN GIFWASTLVA
201: VIGLAFA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)