AT2G23460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : extra-large G-protein 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
extra-large G-protein 1 (XLG1); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3427 Blast hits to 3422 proteins in 394 species: Archae - 0; Bacteria - 2; Metazoa - 2220; Fungi - 618; Plants - 355; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:9995699..9998945 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98801.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.68 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 888 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPLKEDDCCL FAEEYDGPPL SYNIPCAVPI NVEKIPVAAV VSPVCISDNM SFPVIQPILS VESKKFLIDS VSPTSVIANC GSNQLELVSD SITVSPTSVI 101: EHTEEEEEEE GGDGEDCELS SSGELLLRSC SVKESLDLNE SSSNPLVPDW ESNESVLSMD YPSSRVTGDC VSETNGDGKK QPVVTFLGIA SDDGFEEEES 201: CSNLRRVRVV PVKKQPQTKG KKGSCYRCFK GSRFTEKEVC LVCDAKYCNS CVLRAMGSMP EGRKCVTCIG FPIDESKRGS LGKCSRMLKR LLNDLEVKQI 301: MKTERFCEAN QLPAEYVYVN GQPLYPEELV TLQTCSNPPK KLKPGDYWYD KVSGLWGKEG EKPYQIISPH LNVGGPISPE ASNGNTQVFI NGREITKVEL 401: RMLQLAGVQC AGNPHFWVNE DGSYQEEGQK NTKGYIWGKA GTKLLCAVLS LPVPSKSTAN ASGEQLYSAN SRSILDHLEH RTLQKILLVG NSGSGTSTIF 501: KQAKILYKDV PFLEDERENI KVIIQTNVYG YLGMLLEGRE RFEEEALALR NTKQCVLENI PADEGDAKSN DKTVTMYSIG PRLKAFSDWL LKTMAAGNLG 601: VIFPAASREY APLVEELWRD AAIQATYKRR SELGLLPSVA SYFLERAIDV LTPDYEPSDL DILYAEGVTS SSGLACLDFS FPQTASEENL DPSDHHDSLL 701: RYQLIRVPSR GLGENCKWID MFEDVGMVVF VVSMSDYDQV SEDGTNKMLL TKKLFESIIT HPIFENMDFL LILNKYDLLE EKVERVPLAR CEWFQDFNPV 801: VSRHRGSNNG NPTLGQLAFH FMAVKFKRFY SSLTGKKLFV SSSKSLDPNS VDSSLKLAME ILKWSEERTN ICMSEYSMYS TEPSSFSN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)