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AT2G23290.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : myb domain protein 70
Curator
Summary (TAIR10)
Member of the R2R3 factor gene family.
Computational
Description (TAIR10)
myb domain protein 70 (MYB70); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 73 (TAIR:AT4G37260.1); Has 8736 Blast hits to 7850 proteins in 479 species: Archae - 0; Bacteria - 0; Metazoa - 756; Fungi - 600; Plants - 5377; Viruses - 3; Other Eukaryotes - 2000 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5147eggNOG:KOG0048EMBL:AC002391EMBL:AK117263EMBL:AY519574EMBL:BT008343EMBL:CP002685
EnsemblPlants:AT2G23290EnsemblPlants:AT2G23290.1entrez:816861Gene3D:1.10.10.60GeneID:816861GO:GO:0003677GO:GO:0003700
GO:GO:0006355Gramene:AT2G23290.1hmmpanther:PTHR10641hmmpanther:PTHR10641:SF551HOGENOM:HOG000238704IntAct:O22179InterPro:IPR001005
InterPro:IPR009057InterPro:IPR017930KEGG:ath:AT2G23290KO:K09422OMA:PWVNESTPfam:PF00249Pfscan:PS51294
PhylomeDB:O22179PIR:T00503PROSITE:PS51294Proteomes:UP000006548RefSeq:NP_179910.1SMART:SM00717SMR:O22179
STRING:3702.AT2G23290.1SUPFAM:SSF46689TAIR:AT2G23290tair10-symbols:AtMYB70tair10-symbols:MYB70UniGene:At.28681UniProt:O22179
Coordinates (TAIR10) chr2:-:9904895..9905824
Molecular Weight (calculated) 33231.00 Da
IEP (calculated) 5.77
GRAVY (calculated) -0.61
Length 309 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGSTRKEMD RIKGPWSPEE DDLLQSLVQK HGPRNWSLIS KSIPGRSGKS CRLRWCNQLS PEVEHRGFTA EEDDTIILAH ARFGNKWATI ARLLNGRTDN
101: AIKNHWNSTL KRKCSGGGGG GEEGQSCDFG GNGGYDGNLT DEKPLKRRAS GGGGVVVVTA LSPTGSDVSE QSQSSGSVLP VSSSCHVFKP TARAGGVVIE
201: SSSPEEEEKD PMTCLRLSLP WVNESTTPPE LFPVKREEEE EKEREISGLG GDFMTVVQEM IKTEVRSYMA DLQLGNGGGA GGGASSCMVQ GTNGRNVGFR
301: EFIGLGRIE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)