AT2G23230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Terpenoid cyclases/Protein prenyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase 1 (TAIR:AT4G15870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:9892716..9895400 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 69580.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.43 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 606 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTLTFFGPK YGTQVSLLSP NVVSKLSRFP LTSFARKPTK PVCVKTTDCD LVESQRTFNK FPRSDWGDHF LRLPFNVSDM DMLTIEMNAL KSTIRKMLMY 101: SQDVEETKER ILIIYLLVAL GMAYHFEDEI DDNLKHGFEN IETTMAGEND LSTVSVMFWV SGHMDITCLP VRNMFRRFKG EDGKFEECHT KDVKGLLSLY 201: EAAQLGTSTE DILDEAMSFS SSHLECLAGG TCPPHISRLI QNELYMPQHH NAEILFASEY ISFYKQEDVH NKVLLEFAKL NFKFLQLHWI HELKILTKWW 301: NDQDLLSKLP PYFRDRMVEC HLYAVIYYFE PQYSFGRIML AKLLVLLTVV DDTCDRYGSV PEVAKLLDCV ERWDPELGES LPDYLKTVFK FTLDVFEDCE 401: RAGKSEEGLS FNVDGALAER THLNFAEWAA AEKVPTVEEY LEVGGVAVTM YATIALGLLG LGPKAREHGY EWLKSRPKLV HDLATKGRLM NDMGGFKDDI 501: GRGFLANVVN YYMKEYGTTE EETYKEFHKI VRDLEKSVNS EFLKINKGVP REILSRALNC GKMIDVTYRS GDGYTRPRGK FTEYVESLFV EHMDAPVMQY 601: ASSSTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)