AT2G23060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Acyl-CoA N-acyltransferases (NAT) superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 140 Blast hits to 140 proteins in 33 species: Archae - 20; Bacteria - 10; Metazoa - 2; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:9812839..9814633 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46113.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.83 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||
| Length | 413 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTVLVEVREY DPSKDLATVE DVERRCEVGP AGKLSLFTDL LGDPICRVRH SPSYLMLVAE IGPKEKKELV GMIRGCIKTV TCGITTKRLD LTHNKSQNDV 101: VITKPLYTKL AYILGLRVSP THRRQGIGFK LVKAMEDWFS QNGAEYSYFA TENDNHASVN LFTGKCGYAE FRTPSILVNP VYAHRVNISR RVTVIKLEPS 201: DAELLYRLRF STTEFFPRDI DSVLNNKLSL GTFVAVPRGS CYGSGSRSWP GSAKFLEYPP DSWAVLSVWN CKDSFRLEVR GASRLRRVVS KATRMVDKTL 301: PFLKIPSIPA VFRPFGLHFM YGIGGEGPRA EKMVKALCDH AHNLAKEGGC GVVAAEVAGE EPLRRGIPHW KVLSCAEDLW CIKRLGEDYS DGSVGDWTKS 401: PPGDSIFVDP REF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)