suba logo
AT2G23060.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.958
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, flower, pedicel, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT4G37580.1); Has 140 Blast hits to 140 proteins in 33 species: Archae - 20; Bacteria - 10; Metazoa - 2; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
EC:2.3.1.-eggNOG:ENOG410IGKIeggNOG:ENOG410YF8WEMBL:AC004401EMBL:BT030057EMBL:CP002685EnsemblPlants:AT2G23060
EnsemblPlants:AT2G23060.1entrez:816836ExpressionAtlas:O64815Gene3D:3.40.630.30GeneID:816836Genevisible:O64815GO:GO:0008080
hmmpanther:PTHR23091hmmpanther:PTHR23091:SF211HOGENOM:HOG000238837InParanoid:O64815InterPro:IPR000182InterPro:IPR016181iPTMnet:O64815
OMA:RIVIREFPaxDb:O64815Pfam:O64815Pfam:PF00583Pfscan:PS51186PhylomeDB:O64815PIR:A84620
PRIDE:O64815PRO:PR:O64815PROSITE:PS51186ProteinModelPortal:O64815Proteomes:UP000006548RefSeq:NP_179888.1STRING:3702.AT2G23060.1
SUPFAM:SSF55729TAIR:AT2G23060UniGene:At.39348UniProt:O64815
Coordinates (TAIR10) chr2:-:9812839..9814633
Molecular Weight (calculated) 46113.60 Da
IEP (calculated) 8.83
GRAVY (calculated) -0.22
Length 413 amino acids
Sequence (TAIR10)
(BLAST)
001: MTVLVEVREY DPSKDLATVE DVERRCEVGP AGKLSLFTDL LGDPICRVRH SPSYLMLVAE IGPKEKKELV GMIRGCIKTV TCGITTKRLD LTHNKSQNDV
101: VITKPLYTKL AYILGLRVSP THRRQGIGFK LVKAMEDWFS QNGAEYSYFA TENDNHASVN LFTGKCGYAE FRTPSILVNP VYAHRVNISR RVTVIKLEPS
201: DAELLYRLRF STTEFFPRDI DSVLNNKLSL GTFVAVPRGS CYGSGSRSWP GSAKFLEYPP DSWAVLSVWN CKDSFRLEVR GASRLRRVVS KATRMVDKTL
301: PFLKIPSIPA VFRPFGLHFM YGIGGEGPRA EKMVKALCDH AHNLAKEGGC GVVAAEVAGE EPLRRGIPHW KVLSCAEDLW CIKRLGEDYS DGSVGDWTKS
401: PPGDSIFVDP REF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)