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AT2G22850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : basic leucine-zipper 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
basic leucine-zipper 6 (bZIP6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 7 (TAIR:AT4G37730.1); Has 1135 Blast hits to 1135 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 10; Plants - 1100; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0R9eggNOG:ENOG4111AY9EMBL:AC004786EMBL:BT010929EMBL:BT011649EMBL:CP002685EnsemblPlants:AT2G22850
EnsemblPlants:AT2G22850.1EnsemblPlants:AT2G22850.2entrez:816816GeneID:816816GO:GO:0003700GO:GO:0005634GO:GO:0043565
GO:GO:0044212Gramene:AT2G22850.1Gramene:AT2G22850.2hmmpanther:PTHR22952hmmpanther:PTHR22952:SF212HOGENOM:HOG000090752IntAct:O81002
InterPro:IPR004827KEGG:ath:AT2G22850ncoils:CoilOMA:ESCIGSIPfam:PF00170Pfscan:PS50217PhylomeDB:O81002
PIR:F84617PROSITE:PS00036PROSITE:PS50217Proteomes:UP000006548RefSeq:NP_001189580.1RefSeq:NP_179870.1scanprosite:PS00036
SMART:SM00338SMR:O81002STRING:3702.AT2G22850.1SUPFAM:SSF57959TAIR:AT2G22850tair10-symbols:AtbZIP6tair10-symbols:bZIP6
UniGene:At.39378UniProt:O81002
Coordinates (TAIR10) chr2:-:9732601..9733284
Molecular Weight (calculated) 26040.90 Da
IEP (calculated) 8.36
GRAVY (calculated) -0.67
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MMSTVPAFTF TEPGLVNQLS DFQTGFTPWE LNCSDLFSTI HLEPVVPSPC SGESDAGSVK INTDFNGFDE SCIGSIKTNS GSDDSNLFHG VPSPQSDELD
101: SKNTKIRSNA TNHNRNKLNR SVLQVTDDRK RKRMESNRES AKRSRMRKQR HIDNLKDEAN RLGLENRELA NRLRIVLYNI ALMCTDNNQL LSEQEILRRR
201: FLEMRQILIF RQLQLNPSLI INHHHMI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)