suba logo
AT2G22810.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.554
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25402197 (2015): plastid plastid thylakoid plastid thylakoid membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : 1-aminocyclopropane-1-carboxylate synthase 4
Curator
Summary (TAIR10)
key regulatory enzyme in the biosynthesis of the plant hormone ethylene. ACS4 is specifically induced by indoleacetic acid (IAA).
Computational
Description (TAIR10)
1-aminocyclopropane-1-carboxylate synthase 4 (ACS4); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-amino-cyclopropane-1-carboxylate synthase 8 (TAIR:AT4G37770.1); Has 28174 Blast hits to 28171 proteins in 2873 species: Archae - 784; Bacteria - 19102; Metazoa - 651; Fungi - 724; Plants - 1302; Viruses - 0; Other Eukaryotes - 5611 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT2G22810-MONOMERBioGrid:2165EC:4.4.1.14eggNOG:COG0436
eggNOG:KOG0256EMBL:AC004786EMBL:AC005617EMBL:AF332404
EMBL:CP002685EMBL:U23481EMBL:U23482EnsemblPlants:AT2G22810
EnsemblPlants:AT2G22810.1entrez:816812Gene3D:3.40.640.10Gene3D:3.90.1150.10
GeneID:816812Genevisible:Q43309GO:GO:0009693GO:GO:0009835
GO:GO:0016847GO:GO:0030170GO:GO:0042218GO:GO:0042802
GO:GO:0071281Gramene:AT2G22810.1hmmpanther:PTHR11751hmmpanther:PTHR11751:SF431
HOGENOM:HOG000011234InParanoid:Q43309IntAct:Q43309InterPro:IPR004838
InterPro:IPR004839InterPro:IPR015421InterPro:IPR015422InterPro:IPR015424
KEGG:ath:AT2G22810KO:K01762OMA:REFVQTCPaxDb:Q43309
Pfam:PF00155Pfam:Q43309PhylomeDB:Q43309PIR:B84617
PIR:G46376PRIDE:Q43309PRO:PR:Q43309PROSITE:PS00105
ProteinModelPortal:Q43309Proteomes:UP000006548RefSeq:NP_179866.1SABIO-RK:Q43309
scanprosite:PS00105SMR:Q43309STRING:3702.AT2G22810.1SUPFAM:SSF53383
TAIR:AT2G22810tair10-symbols:ACC4tair10-symbols:ACS4tair10-symbols:ATACS4
UniGene:At.1549UniPathway:UPA00384UniProt:Q43309
Coordinates (TAIR10) chr2:-:9717791..9719472
Molecular Weight (calculated) 53798.30 Da
IEP (calculated) 8.33
GRAVY (calculated) -0.35
Length 474 amino acids
Sequence (TAIR10)
(BLAST)
001: MVQLSRKATC NSHGQVSSYF LGWEEYEKNP YDVTKNPQGI IQMGLAENQL CFDLLESWLA QNTDAACFKR DGQSVFRELA LFQDYHGLSS FKNAFADFMS
101: ENRGNRVSFD SNNLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQSSSTNG FRITKLALEE AYEQAKKLDL NVKGILITNP
201: SNPLGTTTTQ TELNILFDFI TKNKNIHLVS DEIYSGTVFN SSEFISVMEI LKNNQLENTD VLNRVHIVCS LSKDLGLPGF RVGAIYSNDK DVISAATKMS
301: SFGLVSSQTQ YLLSSLLSDK KFTKNYLREN QKRLKNRQRK LVLGLEAIGI KCLKSNAGLF CWVDMRPLLR SKTFEAEMDL WKKIVYEVKL NISPGSSCHC
401: EEPGWFRVCF ANMIDETLKL ALKRLKMLVD DENSSRRCQK SKSERLNGSR KKTMSNVSNW VFRLSFHDRE AEER
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)