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AT2G22360.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26987276 (2016): plastid
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:24872594 (2014): plastid plastid envelope
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid thylakoid
  • PMID:15322131 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to heat; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Chaperone DnaJ (InterPro:IPR012724), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT4G39960.1); Has 29493 Blast hits to 29023 proteins in 3518 species: Archae - 206; Bacteria - 11054; Metazoa - 4574; Fungi - 2545; Plants - 2863; Viruses - 57; Other Eukaryotes - 8194 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0715EMBL:AC006592EMBL:AK229509
EMBL:AY084303EMBL:BT008670EMBL:CP002685EnsemblPlants:AT2G22360
EnsemblPlants:AT2G22360.1entrez:816768Gene3D:1.10.287.110Gene3D:2.10.230.10
GeneID:816768GO:GO:0005524GO:GO:0006457GO:GO:0009408
GO:GO:0009507GO:GO:0009535GO:GO:0009941GO:GO:0046872
Gramene:AT2G22360.1HAMAP:MF_01152hmmpanther:PTHR24078hmmpanther:PTHR24078:SF315
InterPro:IPR001305InterPro:IPR001623InterPro:IPR002939InterPro:IPR008971
InterPro:IPR012724InterPro:IPR018253KEGG:ath:AT2G22360KO:K03686
OMA:KISYIDAPaxDb:Q9SJZ7Pfam:PF00226Pfam:PF00684
Pfam:PF01556Pfscan:PS50076Pfscan:PS51188PhylomeDB:Q9SJZ7
PIR:G84611PRINTS:PR00625PROSITE:PS00636PROSITE:PS50076
PROSITE:PS51188ProteinModelPortal:Q9SJZ7Proteomes:UP000006548RefSeq:NP_565533.1
scanprosite:PS00636SMART:SM00271SMR:Q9SJZ7STRING:3702.AT2G22360.1
SUPFAM:SSF46565SUPFAM:SSF49493SUPFAM:SSF57938TAIR:AT2G22360
TIGRfam:TIGR02349TIGRFAMs:TIGR02349UniGene:At.39446UniProt:Q9SJZ7
Coordinates (TAIR10) chr2:+:9498162..9500459
Molecular Weight (calculated) 47763.90 Da
IEP (calculated) 9.49
GRAVY (calculated) -0.44
Length 442 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)