suba logo
AT2G22240.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : myo-inositol-1-phosphate synthase 2
Curator
Summary (TAIR10)
** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.
Computational
Description (TAIR10)
myo-inositol-1-phosphate synthase 2 (MIPS2); CONTAINS InterPro DOMAIN/s: Myo-inositol-1-phosphate synthase (InterPro:IPR002587), Myo-inositol-1-phosphate synthase, GAPDH-like (InterPro:IPR013021), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: myo-inositol-1-phosphate synthase 1 (TAIR:AT4G39800.1); Has 1859 Blast hits to 1855 proteins in 512 species: Archae - 101; Bacteria - 453; Metazoa - 126; Fungi - 158; Plants - 764; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G22240-MONOMERBioCyc:ARA:GQT-2815-MONOMERBioGrid:2110BRENDA:5.5.1.4EC:5.5.1.4eggNOG:COG1260eggNOG:KOG0693
EMBL:AC007168EMBL:AY053415EMBL:AY054202EMBL:AY143904EMBL:CP002685EMBL:U30250EnsemblPlants:AT2G22240
EnsemblPlants:AT2G22240.1entrez:816757ExpressionAtlas:Q38862Gene3D:3.40.50.720GeneID:816757Genevisible:Q38862GO:GO:0004512
GO:GO:0005737GO:GO:0006021GO:GO:0008654GO:GO:0009408GO:GO:0009644GO:GO:0009733GO:GO:0009793
GO:GO:0010264GO:GO:0016036GO:GO:0042542GO:GO:0042742GO:GO:0050832GO:GO:0051607gramene_pathway:5.5.1.4
gramene_pathway:PWY-2301gramene_pathway:PWY-4661gramene_plant_reactome:1119378gramene_plant_reactome:6875463hmmpanther:PTHR11510hmmpanther:PTHR11510:SF6HOGENOM:HOG000013469
InParanoid:Q38862IntAct:Q38862InterPro:IPR002587InterPro:IPR013021InterPro:IPR016040KEGG:00521+5.5.1.4KEGG:00562+5.5.1.4
KEGG:ath:AT2G22240KO:K01858OMA:NPVLYAPPANTHER:PTHR11510PaxDb:Q38862Pfam:PF01658Pfam:PF07994
Pfam:Q38862PhylomeDB:Q38862PIR:D84610PIRSF:PIRSF015578PRIDE:Q38862PRO:PR:Q38862ProteinModelPortal:Q38862
Proteomes:UP000006548Reactome:R-ATH-1855183RefSeq:NP_179812.1SABIO-RK:Q38862SMR:Q38862STRING:3702.AT2G22240.1SUPFAM:SSF51735
SUPFAM:SSF55347TAIR:AT2G22240tair10-symbols:ATIPS2tair10-symbols:ATMIPS2tair10-symbols:MIPS2UniGene:At.14447UniGene:At.48504
UniPathway:UPA00823UniProt:Q38862
Coordinates (TAIR10) chr2:-:9451901..9453938
Molecular Weight (calculated) 56340.60 Da
IEP (calculated) 5.15
GRAVY (calculated) -0.17
Length 510 amino acids
Sequence (TAIR10)
(BLAST)
001: MFIESFKVES PNVKYTENEI NSVYDYETTE VVHENRNGTY QWVVKPKTVK YDFKTDTRVP KLGVMLVGWG GNNGSTLTAG VIANKEGISW ATKDKVQQAN
101: YFGSLTQASS IRVGSYNGEE IYAPFKSLLP MVNPEDVVFG GWDISDMNLA DAMARARVLD IDLQKQLRPY MENMIPLPGI YDPDFIAANQ GSRANSVIKG
201: TKKEQVDHII KDMREFKEKN KVDKLVVLWT ANTERYSNVI VGLNDTTENL LASVEKDESE ISPSTLYAIA CVLEGIPFIN GSPQNTFVPG LIELAISKNC
301: LIGGDDFKSG QTKMKSVLVD FLVGAGIKPT SIVSYNHLGN NDGMNLSAPQ TFRSKEISKS NVVDDMVASN GILFEPGEHP DHVVVIKYVP YVADSKRAMD
401: EYTSEIFMGG RNTIVLHNTC EDSLLAAPII LDLVLLAELS TRIQFKAEGE GKFHSFHPVA TILSYLTKAP LVPPGTPVVN ALSKQRAMLE NILRACVGLA
501: PENNMIMEYK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)