AT2G22125.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : binding | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), Armadillo-like helical (InterPro:IPR011989), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein (TAIR:AT1G77460.2); Has 7763 Blast hits to 3084 proteins in 288 species: Archae - 8; Bacteria - 60; Metazoa - 1765; Fungi - 937; Plants - 4329; Viruses - 0; Other Eukaryotes - 664 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:9406793..9414223 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 230719.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.97 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 2150 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MTSALGWRFP STNGNGLAPS DTERNGDMKM HDSEPPTPHS TTKMSLRDRT TSMEDPDGTL ASVAQCIEQL RQGSSSAQER EYCLKQLLDL IEMRENAFSA 0101: VGSHSQAVPV LVSLLRSGSV GVKIQAATVL GSLCKENELR VKVLLGGCIP PLLGLLKSSS VEGQIAAAKT IYAVSEGGVK DHVGSKIFST EGVVPVLWDQ 0201: LRSGNKKGEV DGLLTGALKN LSSTTEGFWS ETIRAGGVDV LVKLLTSGQS STLSNVCFLL ACMMMEDASV CSSVLTADIT KQLLKLLGSG NEAPVRAEAA 0301: AALKSLSAQS KEAKREIANS NGIPVLINAT IAPSKEFMQG EYAQALQENA MCALANISGG LSYVISSLGQ SLESCSSPAQ TADTLGALAS ALMIYDGKAE 0401: TTRASDPLVV EQTLLKQFKP RLPFLVQERT IEALASLYGN SILSVKLSNS DAKRLLVGLI TMAVNEVQDE LVKALLMLCN HEGSLWQALQ GREGIQLLIS 0501: LLGLSSEQQQ ECAVALLCLL SNENDESKWA ITAAGGIPPL VQILETGSAK AREDSATILR NLCNHSEDIR ACVESADAVP ALLWLLKNGS PNGKEIAAKT 0601: LNHLIHKSDT ATISQLTALL TSDLPESKIY VLDALKSMLS VVPFNDMLRE GSASNDAIET MIKLMSSGKE ETQANSASAL AAIFQSRKDL RESALALKTL 0701: LSAIKLLNVD SERILVESCR CLAAILLSIK ENRDVAISAR EALPTIVSLA NSSVLEVAEQ GMCALANLIL DSEVSEKVIV EDIILSATRI LREGTVSGKT 0801: LAAAAIARLL SRRRIDSALT DSVNRAGTVL TLVSLLESAD GRSDAISEAL DALAIFSRSG ANGNVKPAWA VLAESPNSMA PIVSSIVSVA NPSLQDKAIE 0901: VLSRLCRDQP IVLGNMVNNA RDCVSSIAKR VINTRDPKIK IGGAAIIICA AKVDDQKMIE NLNETQLCAK FVQALVGILD SVQDQEKDEK DKICICIHPK 1001: EKEEDEEEEA TENREGSTGA TVISGDNLAI WLLSVLSCHD EKSRAVILES EGIELITDRI GNRFLQADNG EDANIWVCAL LLAILFQDRE ITRAHATMKA 1101: VPVLSNLVKS EEYADRYFAA QALASLVCNG SRGTLLSVAN SGAAAGFISL LGCSDDDIKE LLQLSQEFTL VRYPDQVALE RLFRVEDIRV GATSRKAIPL 1201: LVELLKPIPD RPGAPLLSLN LLTQLAGDCP QNMIVMVESG ALEGLSKYLS LGPQDEQEEA ATGLLGILFS SAEIRRHESA FGAVSQLVAV LRLGGRGARY 1301: SAAKALDSLF TADHIRNAES SRQAVQPLVE ILNTGSEREQ HAAIAALVRL LSDNPSRALA VADVEMNAVD VLCRILSSNY TMELKGDAAE LCYVLFANTR 1401: IRSTVAAARC VEPLVSLLVT EFSPAQHSVV RALDKLVDDE QLAELVAAHG AVVPLVGLLY GKNYVLHEAI SRALVKLGKD RPACKLEMVK AGVIDCVLDI 1501: LHEAPDFLCA AFSELLRILT NNATIAKGQS AAKVVEPLFH LLTRLEFGAD GQHSALQVLV NILEHPQCRA DYTLTPHQVI EPLIPLLESP SPAVQQLAAE 1601: LLSHLLYEEH LQKDPLTQLA IGPLIHVLGS GIHLLQQRAV KALVSIALTW PNEIAKEGGV SELSKVILQA DPSLSNVLWE SAASILVIIL QFSSEFYLEV 1701: PVAVLVRLLR SASENTVVGA LNALLVLESD DGTSAESMAE SGAIEALLDL LRSHQCEDTA ARLLEVLLNN VKIRDSKATK TAILPLSQYL LDPQTQAQQA 1801: RLLATLALGD LFQNEALARS TDAASACRAL VNVLEEQPTE EMKVVAICAL QNLVMYSRSN KRAVAEAGGV QVVLDLISSS DPETSVQAAM FVKLLFSNHT 1901: VQEYASSETV RAITAAIEKD LWATGTVNDE YLKALNSLFN NFPRLRATEP ATLSIPHLVT SLKTGSEATQ EAALDALFLL RQAWSACPAE VSRAQSVAAA 2001: DAIPLLQYLI QSGPPRFQEK AEFLLQCLPG TLVVTIKRGN NMKQSVGNPS VFCKITLGNN PPRQTKVIST GPNPEWDESF SWSFESPPKG QKLHISCKNK 2101: SKMGKSSFGK VTIQIDRVVM LGAVAGEYSL LPESKSGPRN LEIEFQWSNK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)