suba logo
AT2G21300.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 0.993
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP binding microtubule motor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT4G38950.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5059eggNOG:KOG0242EMBL:CP002685EnsemblPlants:AT2G21300EnsemblPlants:AT2G21300.1EnsemblPlants:AT2G21300.2entrez:816669
Gene3D:3.40.850.10GeneID:816669GO:GO:0003777GO:GO:0005524GO:GO:0005874GO:GO:0005886GO:GO:0007018
Gramene:AT2G21300.1Gramene:AT2G21300.2hmmpanther:PTHR24115hmmpanther:PTHR24115:SF405InterPro:IPR001752InterPro:IPR019821InterPro:IPR021881
InterPro:IPR027417InterPro:IPR027640KEGG:ath:AT2G21300KO:K11498ncoils:CoilOMA:NDITHAVPANTHER:PTHR24115
Pfam:PF00225Pfam:PF11995Pfscan:PS50067PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067Proteomes:UP000006548
RefSeq:NP_001031385.1RefSeq:NP_179726.2scanprosite:PS00411SMART:SM00129SMR:F4IGL2STRING:3702.AT2G21300.1SUPFAM:SSF52540
TAIR:AT2G21300UniGene:At.43710UniProt:F4IGL2
Coordinates (TAIR10) chr2:-:9114396..9118292
Molecular Weight (calculated) 96676.30 Da
IEP (calculated) 7.31
GRAVY (calculated) -0.57
Length 862 amino acids
Sequence (TAIR10)
(BLAST)
001: MGAIAGEELK KMEKTQVHVA REEKILVLVR LRPLNEKEIL ANEAADWECI NDTTVLYRNT LREGSTFPSA YSFDRVYRGE CPTRQVYEDG PKEVALSVVK
101: GINSSIFAYG QTSSGKTYTM SGITEFAVAD IFDYIFKHED RAFVVKFSAI EIYNEAIRDL LSPDSTPLRL RDDPEKGAAV EKATEETLRD WNHLKELISV
201: CEAQRKIGET SLNERSSRSH QIIKLTVESS AREFLGKENS TTLMASVNFI DLAGSERASQ ALSAGARLKE GCHINRSLLT LGTVIRKLSN GRQGHINYRD
301: SKLTRILQPC LGGNARTAIV CTLSPARSHV EQTRNTLLFA CCAKEVTTKA QINVVMSDKA LVKQLQRELA RLESELRNPA PATSSCDCGV TLRKKDLQIQ
401: KMEKQLAEMT KQRDIAQSRL EDFMKMVEHD ASSKAGTPHF RNRTNKWEDG SVSEISGVVD PDRTSFISDG TSTPLSTARA HVRSHSDDDL EEEMSPRHSG
501: DQSEEYCKEV QCIEMEESTR DINNDSEERT DAETLLGHNA EANGETGSAQ HRIPSSVRSV RRRKSWSRGD TMTGTSTPPD ALETDYRGRP EGHGFAFPDL
601: EFGSGGKLLR NDSMTSRGSD STEAHSIGTP LVGEEGGITS IRSFVEGLKE MVSDPENSGK MRKDIGVDAM EEEVSGTMTN WSEEFERQRE QILGLWQTCH
701: VSLVHRTYFF LLFTGDQADS IYIGVELRRL SFMKESFSQG NHAFERGQTL TIASSLKALH RERRMLSKLV GKRFTGEERK RLYQKFGIAV NSKRRRLQLA
801: NQLWSKPNDI THAVESAAVV AKLVRFVEQG RAMKEMFGLS FTPPLPTTRR SLNWRKSMAT LF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)