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AT2G21230.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Basic-leucine zipper (bZIP) transcription factor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G38900.3); Has 3137 Blast hits to 2142 proteins in 311 species: Archae - 10; Bacteria - 435; Metazoa - 539; Fungi - 212; Plants - 1074; Viruses - 4; Other Eukaryotes - 863 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410II1QeggNOG:ENOG410YAHKEMBL:AC007142EMBL:AF401298EMBL:AY054497EMBL:AY093268EMBL:CP002685
EnsemblPlants:AT2G21230EnsemblPlants:AT2G21230.1entrez:816660ExpressionAtlas:Q9SIG8GeneID:816660GO:GO:0003700GO:GO:0043565
Gramene:AT2G21230.1hmmpanther:PTHR13690hmmpanther:PTHR13690:SF76HOGENOM:HOG000239687IntAct:Q9SIG8InterPro:IPR004827ncoils:Coil
Pfam:PF00170Pfscan:PS50217PhylomeDB:Q9SIG8PIR:G84598PROSITE:PS50217Proteomes:UP000006548RefSeq:NP_179719.1
SMART:SM00338SMR:Q9SIG8STRING:3702.AT2G21230.3SUPFAM:SSF57959TAIR:AT2G21230UniGene:At.22873UniProt:Q9SIG8
Coordinates (TAIR10) chr2:-:9093920..9096059
Molecular Weight (calculated) 56329.50 Da
IEP (calculated) 8.76
GRAVY (calculated) -0.80
Length 519 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGGGDTTDT NMMQRVNSSS GTSSSSIPKH NLHLNPALIR SHHHFRHPFT GAPPPPIPPI SPYSQIPATL QPRHSRSMSQ PSSFFSFDSL PPLNPSAPSV
101: SVSVEEKTGA GFSPSLPPSP FTMCHSSSSR NAGDGENLPP RKSHRRSNSD VTFGFSSMMS QNQKSPPLSS LERSISGEDT SDWSNLVKKE PREGFYKGRK
201: PEVEAAMDDV FTAYMNLDNI DVLNSFGGED GKNGNENVEE MESSRGSGTK KTNGGSSSDS EGDSSASGNV KVALSSSSSG VKRRAGGDIA PTGRHYRSVS
301: MDSCFMGKLN FGDESSLKLP PSSSAKVSPT NSGEGNSSAY SVEFGNSEFT AAEMKKIAAD EKLAEIVMAD PKRVKRILAN RVSAARSKER KTRYMAELEH
401: KVQTLQTEAT TLSAQLTHLQ RDSMGLTNQN SELKFRLQAM EQQAQLRDAL SEKLNEEVQR LKLVIGEPNR RQSGSSSSES KMSLNPEMFQ QLSISQLQHQ
501: QMQHSNQCST MKAKHTSND
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)