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AT2G21080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:14760709 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 141 Blast hits to 141 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IRYAeggNOG:ENOG410YE5GEMBL:AY139997EMBL:BT008502EMBL:CP002685EnsemblPlants:AT2G21080EnsemblPlants:AT2G21080.1
entrez:816643GeneID:816643GO:GO:0005773GO:GO:0016021Gramene:AT2G21080.1hmmpanther:PTHR31963hmmpanther:PTHR31963:SF3
HOGENOM:HOG000239174InterPro:IPR021924KEGG:ath:AT2G21080OMA:FEFSLVMPfam:PF12056PhylomeDB:Q8L726Proteomes:UP000006548
RefSeq:NP_179704.2TAIR:AT2G21080TMHMM:TMhelixUniGene:At.35645UniGene:At.39609UniProt:Q8L726
Coordinates (TAIR10) chr2:+:9043707..9045113
Molecular Weight (calculated) 46794.60 Da
IEP (calculated) 8.47
GRAVY (calculated) 0.53
Length 414 amino acids
Sequence (TAIR10)
(BLAST)
001: MNPGEDEYFL LHLPNLSNTP LQPSKSLPSD DLRNFRLLLK WCALDHSSSC GKAVSYMMFV VFTLLVPLIS CLFIKTPRNR PSAVMDANSF NVLVQFPESG
101: LAVIGFLTLI CFFRIYSLTK LLFLDDSTLV RLGYSRELDK ALRYLAYILV PSFLVELVHK SIFFYSAEVS FPFIKSSCAA LNFVMFFLVL FSWVYRTGVF
201: LLVCILFRLT CELQILRFRG LHKLFDRCGS DTIEDVCKEH VRIKKQLSAT SHRYRFFIIT AFVVISTSQF VALLLVLASK SEKSFLSSGD LVVCSAVQLS
301: GFFLCLLGAA RITHRAQGVV CIATRWHMAL TCASEAVSPE SDTDSSDNIY INVSPSLDLS SFFQARQALV EYLRHNNKGI TLYGYALDRG LLHTLFAFEF
401: SLVMWILSKV VVLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)