suba logo
AT2G21070.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
mitochondrion 0.878
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : methyltransferases
Curator
Summary (TAIR10)
This gene is predicted to an encode a nuclear-localized protein that is involved in regulating the period of circadian rhythms without affecting their amplitude or robustness. FIONA1 seems to act as a central oscillator-associated component, but its transcript levels are not regulated in a circadian or light-dependent manner. FIONA1 also appears to be involved in photoperiod-dependent flowering.
Computational
Description (TAIR10)
FIONA1 (FIO1); FUNCTIONS IN: methyltransferase activity; INVOLVED IN: photoperiodism, flowering, circadian rhythm, photoperiodism; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted (InterPro:IPR017182), S-adenosyl-L-methionine dependent methyltransferase, predicted (InterPro:IPR010286); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-620-MONOMERBioCyc:ARA:GQT-621-MONOMERBioCyc:ARA:GQT-622-MONOMEREC:2.1.1.-eggNOG:COG3129eggNOG:KOG2912EMBL:BT015875
EMBL:BT020210EMBL:CP002685EnsemblPlants:AT2G21070EnsemblPlants:AT2G21070.1entrez:816642ExpressionAtlas:Q5XEU1Gene3D:3.40.50.150
GeneID:816642GO:GO:0008168Gramene:AT2G21070.1hmmpanther:PTHR13393hmmpanther:PTHR13393:SF0HOGENOM:HOG000030830InterPro:IPR010286
InterPro:IPR017182InterPro:IPR029063KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-
KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-KEGG:00860+2.1.1.-
KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-PANTHER:PTHR13393
Pfam:PF05971PhylomeDB:Q5XEU1PIRSF:PIRSF037350Proteomes:UP000006548RefSeq:NP_179703.2SMR:Q5XEU1STRING:3702.AT2G21070.3
SUPFAM:SSF53335TAIR:AT2G21070tair10-symbols:FIO1UniGene:At.35645UniGene:At.47732UniProt:Q5XEU1
Coordinates (TAIR10) chr2:+:9040940..9043136
Molecular Weight (calculated) 53863.00 Da
IEP (calculated) 7.34
GRAVY (calculated) -0.26
Length 483 amino acids
Sequence (TAIR10)
(BLAST)
001: MRSGKKRARS EPGSTKQPRS KYSDNPPDFA SLASLYPSFK PFVFFSGSRA RIDWTDYNAT RELTRVLLLH DHGVNWWIPD GQLCPTVPNR SNYIHWINDL
101: LSSGIIQSLG GDGSKVKGFD IGTGANCIYP LLGASLFGWS FVGSDFTVVA LEWAEKNVQS NPHFSDLIEI RDSKVPPQCS SVPEVENTER EKTIQEEAEI
201: SATVKSDYHD NKSFIEPAVL LGVVKENETF DFCMSNPPFF ETFEEAGLNP KTSCGGTPEE MVCNGGEQAF VSRIIKDSAV LRQRFRWYTS MLGKKANLKL
301: LISKLWEVGV TIVKTTEFVQ GQTSRWGLAW SFMPIARKII APPVVKKSVL SFMLECIKRQ YSAVDVLQSV EEFFKSCGAS CKLNSSTFSV DIVASNDQCN
401: TISKNDIADV DSVRSHGYEK QSLDGSSLQV PEYNLSFRIL VFQQMPGTLL IKGSLQQKDS PLSGLFSRVF GSLEESLKSK FCR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)