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AT2G21050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : like AUXIN RESISTANT 2
Curator
Summary (TAIR10)
Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.
Computational
Description (TAIR10)
like AUXIN RESISTANT 2 (LAX2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUX1 3 (TAIR:AT1G77690.1); Has 1017 Blast hits to 1012 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 224; Plants - 668; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Protein Annotations
BioGrid:1993eggNOG:COG0814eggNOG:KOG1303EMBL:AC006264EMBL:AJ243221EMBL:AY054684EMBL:AY128714
EMBL:CP002685EnsemblPlants:AT2G21050EnsemblPlants:AT2G21050.1entrez:816640GeneID:816640Genevisible:Q9S836GO:GO:0003333
GO:GO:0005886GO:GO:0009624GO:GO:0009734GO:GO:0010588GO:GO:0015171GO:GO:0015293GO:GO:0016021
GO:GO:0048829Gramene:AT2G21050.1hmmpanther:PTHR22950hmmpanther:PTHR22950:SF242HOGENOM:HOG000238482InParanoid:Q9S836InterPro:IPR013057
KEGG:ath:AT2G21050KO:K13946OMA:MCKRAAAPaxDb:Q9S836Pfam:PF01490Pfam:Q9S836PhylomeDB:Q9S836
PIR:E84596PRO:PR:Q9S836ProteinModelPortal:Q9S836Proteomes:UP000006548RefSeq:NP_179701.1STRING:3702.AT2G21050.1TAIR:AT2G21050
tair10-symbols:LAX2TMHMM:TMhelixUniGene:At.438UniProt:Q9S836
Coordinates (TAIR10) chr2:+:9034289..9036439
Molecular Weight (calculated) 54705.90 Da
IEP (calculated) 8.75
GRAVY (calculated) 0.44
Length 483 amino acids
Sequence (TAIR10)
(BLAST)
001: MENGEKAAET VVVGNYVEME KDGKALDIKS KLSDMFWHGG SAYDAWFSCA SNQVAQVLLT LPYSFSQLGM LSGILFQLFY GILGSWTAYL ISILYVEYRT
101: RKEREKVNFR NHVIQWFEVL DGLLGKHWRN VGLAFNCTFL LFGSVIQLIA CASNIYYIND NLDKRTWTYI FGACCATTVF IPSFHNYRIW SFLGLLMTTY
201: TAWYLTIASI LHGQVEGVKH SGPSKLVLYF TGATNILYTF GGHAVTVEIM HAMWKPQKFK SIYLFATLYV LTLTLPSASA VYWAFGDLLL NHSNAFALLP
301: KNLYRDFAVV LMLIHQFITF GFACTPLYFV WEKLIGMHEC RSMCKRAAAR LPVVIPIWFL AIIFPFFGPI NSTVGSLLVS FTVYIIPALA HIFTFRSSAA
401: RENAVEQPPR FLGRWTGAFT INAFIVVWVF IVGFGFGGWA SMINFVHQID TFGLFTKCYQ CPPPVMVSPP PISHPHFNHT HGL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)