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AT2G20515.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JCFKeggNOG:ENOG410YQFFEMBL:AC007109EMBL:BT008697EMBL:BT020294EMBL:BT024762EMBL:CP002685
EnsemblPlants:AT2G20515EnsemblPlants:AT2G20515.1entrez:816573GeneID:816573Gramene:AT2G20515.1hmmpanther:PTHR33210hmmpanther:PTHR33210:SF5
HOGENOM:HOG000240913KEGG:ath:AT2G20515OMA:EAWPRMVPhylomeDB:Q8S8D0Proteomes:UP000006548RefSeq:NP_565474.1TAIR:AT2G20515
TMHMM:TMhelixUniGene:At.39682UniProt:Q8S8D0
Coordinates (TAIR10) chr2:-:8839041..8839595
Molecular Weight (calculated) 17564.10 Da
IEP (calculated) 8.94
GRAVY (calculated) -0.16
Length 155 amino acids
Sequence (TAIR10)
(BLAST)
001: MHIMDTLCSP SRLVLVTFFL LCFFAGDSSA TRPGFIYTRH RGRCTPQYWS SQREAWPRMV PERSTVEKIF GVMVAKERWR SDLTLVESTA RNDEEGNAYG
101: ALLKQGIAAL INSYARKSFS YAPWEVKTML IQAMVSESAA RRQAEHFAVA NVACD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)