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AT2G20500.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JM52eggNOG:ENOG41118T9EMBL:AC007109EMBL:AY219090EMBL:AY649234EMBL:CP002685EnsemblPlants:AT2G20500
EnsemblPlants:AT2G20500.1entrez:816571GeneID:816571Gramene:AT2G20500.1hmmpanther:PTHR33098hmmpanther:PTHR33098:SF8HOGENOM:HOG000153478
KEGG:ath:AT2G20500OMA:CLRIRLLPhylomeDB:Q9SIL9PIR:A84590Proteomes:UP000006548RefSeq:NP_179640.1TAIR:AT2G20500
UniGene:At.39683UniGene:At.52845UniGene:At.66384UniGene:At.70851UniProt:Q9SIL9
Coordinates (TAIR10) chr2:-:8835300..8835710
Molecular Weight (calculated) 16228.80 Da
IEP (calculated) 11.37
GRAVY (calculated) -0.81
Length 136 amino acids
Sequence (TAIR10)
(BLAST)
001: MSCLRIRLLP AKRAWKSFTA SFHKLRGSKT KHHTKYKAST SDKHFLRSSH RSRENVRDRD SRVFFIRLKR GCLFKKKRKD VVYVDKLFRE PVAVSNWIPA
101: KQWKPKEELF PEKGIDERAE EFITRVKAEI LASRNL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)