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AT2G20050.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: cAMP-dependent protein kinase regulator activity, protein kinase activity, protein serine/threonine phosphatase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, N-terminal protein myristoylation, regulation of protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1); Has 64548 Blast hits to 63479 proteins in 2268 species: Archae - 40; Bacteria - 8440; Metazoa - 24888; Fungi - 7627; Plants - 9963; Viruses - 207; Other Eukaryotes - 13383 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G20050-MONOMERBioCyc:ARA:GQT-1126-MONOMEREC:3.1.3.16eggNOG:COG0664eggNOG:KOG0616eggNOG:KOG0698eggNOG:KOG1113
EMBL:AC006081EMBL:AK230102EMBL:BT022072EMBL:BT023477EMBL:CP002685EMBL:EU101468EMBL:EU101469
EMBL:EU591510EnsemblPlants:AT2G20050EnsemblPlants:AT2G20050.1entrez:816524ExpressionAtlas:Q9SL76Gene3D:2.60.120.10Gene3D:3.60.40.10
GeneID:816524Genevisible:Q9SL76GO:GO:0004674GO:GO:0004721GO:GO:0005524GO:GO:0005886GO:GO:0046872
hmmpanther:PTHR24353hmmpanther:PTHR24353:SF80HOGENOM:HOG000030238InParanoid:Q9SL76InterPro:IPR000222InterPro:IPR000595InterPro:IPR000719
InterPro:IPR001932InterPro:IPR011009InterPro:IPR014710InterPro:IPR018490iPTMnet:Q9SL76OMA:PAHRKTWPaxDb:Q9SL76
Pfam:PF00027Pfam:PF00069Pfam:PF00481Pfam:Q9SL76Pfscan:PS50011Pfscan:PS50042Pfscan:PS51746
PhylomeDB:Q9SL76PIR:D84584PRIDE:Q9SL76PRO:PR:Q9SL76PROSITE:PS01032PROSITE:PS50011PROSITE:PS50042
PROSITE:PS51746ProteinModelPortal:Q9SL76Proteomes:UP000006548RefSeq:NP_179595.5scanprosite:PS01032SMART:SM00100SMART:SM00220
SMART:SM00332SMR:Q9SL76STRING:3702.AT2G20050.1SUPFAM:SSF51206SUPFAM:SSF56112SUPFAM:SSF81606TAIR:AT2G20050
UniGene:At.47727UniProt:Q9SL76
Coordinates (TAIR10) chr2:-:8649779..8654193
Molecular Weight (calculated) 121395.00 Da
IEP (calculated) 4.82
GRAVY (calculated) -0.29
Length 1094 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGCAYSKTCI GQICATKENS IRQTHQQAPS RGGTRATAAA AAVEEDNPVF NFSSDAVDDV DNDEIHQLGL SRDQEWGITR LSRVSSQFLP PDGSRVVKVP
0101: SCNYELRCSF LSQRGYYPDA LDKANQDSFA IHTPFGSNSD DHFFGVFDGH GEFGAQCSQF VKRRLCENLL RHGRFRVDPA EACNSAFLTT NSQLHADLVD
0201: DSMSGTTAIT VMVRGRTIYV ANAGDSRAVL AEKRDGDLVA VDLSIDQTPF RPDELERVKL CGARVLTLDQ IEGLKNPDVQ CWGTEEDDDG DPPRLWVPNG
0301: MYPGTAFTRS IGDSIAETIG VVANPEIAVV ELTPDNPFFV VASDGVFEFI SSQTVVDMVA KHKDPRDACA AIVAESYRLW LQYETRTDDI TIIVVHIDGL
0401: KDDAPRQLSS TGTQLQPPIP QVVELTGSES PSTFGWNSKN QRVRHDLSRA RIRAIENSLE NGHAWVPPSP AHRKTWEEEA HIERVLRDHF LFRKLTDSQC
0501: QVLLDCMQRL EANPGDIVVK QGGEGDCFYV VGSGEFEVLA TQDGKNGEVP RILQRYTAEK QSSFGELALM HNKPLQASVR AVDHGTLWAL KREDFRGILM
0601: SEFSNLASLK LLRSVDLLSR LTILQLSHVA ESLSEACFSD GQTIVTKDQK LQGLYVIQKG RVKISFCTEV LESQNVSSLT TGITNEYDNL EIGTEVSIEK
0701: HEGSYFGEWA LLGELKDSLS VVAVGEVVCV VLTKENFESA VGPLTNISDD GPKTRHSSFE LSKESAKVTD TTALAKATLA DLEWTTCLST TDCSEIGLVH
0801: LKDKENLLSL KRFSKQKVKK LGKEAQVLKE RNLMKNVIKP SAIVPEILCT CVDQTFAAIL LNTTLACPIS SLLHSPLDES SVRFITGSLV SAIEDIHKNE
0901: ILFRGSSPEL LMLDQSGYLQ IVDFRFAKKL SGERTFTICG NADYLAPEIV QGKGHGYAAD WWALGVLIYY MLEGEMPFGS WRESELDTFQ KIAKGQLTFP
1001: RVLSSEAEDL ITKLLEVDEN LRFGSQGGPE SIKKHPWFNG LKWEAISNRE FQVPQEIISR IHHHLENDNV LPLETSKSLD TTEDQDAQNW LEEW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)