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AT2G19650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.788
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Cysteine/Histidine-rich C1 domain family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G37620.1); Has 1789 Blast hits to 656 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 1744; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J8VYeggNOG:ENOG41119PWEMBL:AC005917EMBL:AK226607EMBL:AY099827EMBL:BT000783EMBL:BT002184
EMBL:CP002685EnsemblPlants:AT2G19650EnsemblPlants:AT2G19650.1entrez:816484GeneID:816484GO:GO:0005622GO:GO:0035556
GO:GO:0047134Gramene:AT2G19650.1hmmpanther:PTHR32410hmmpanther:PTHR32410:SF152HOGENOM:HOG000064693IntAct:Q9ZUM8InterPro:IPR002219
InterPro:IPR004146KEGG:ath:AT2G19650OMA:HVCHNQPPfam:PF03107Pfam:PF07649PhylomeDB:Q9ZUM8PIR:D84579
Proteomes:UP000006548RefSeq:NP_179555.1SMART:SM00109SMR:Q9ZUM8STRING:3702.AT2G19650.1SUPFAM:SSF57889TAIR:AT2G19650
UniGene:At.27707UniProt:Q9ZUM8
Coordinates (TAIR10) chr2:-:8493655..8495703
Molecular Weight (calculated) 79122.40 Da
IEP (calculated) 7.03
GRAVY (calculated) -0.42
Length 682 amino acids
Sequence (TAIR10)
(BLAST)
001: MENFLALFNE GMDEEASRLE KLLPFHEHPL IPFTRFEFTK CKGCYSTDED NTSFISKHPG CSYIYGGHRC NEPGCDVVFH EECAKPLPEI DHPYHPVHPL
101: KLILLHTRVS NCSFCGEFFS VGYRCNKCDF QLDLICARRP ALLVLAENSY LHEHPLQLSH EAHETLRDCK GCGHQHNSWK HFYTCHQCEF FISLDCIDHN
201: SPEAYHTSHP QHPLKSLRYE VPGYADKKCL LCREEFDGIH RQLHHCGVCN FSICRSCMKN PPPVLVKSPR THEHQLHLVP RRIDFTCNAC GTLGDRSPYF
301: CLQCNFMIHR ECIDLPRVIN INRHDHRISY TPRLGHGDGK CRVCRKNVDG FYGAYSCSKC FDYFVHSRCA TRRDVWDMIE LEGTPEEEET APFKVIDDNT
401: IDHYGHKHNL RIYRGWNLPE SVVCTACVFQ ICSEPFYACA RKRCDFIIHE KCAKLPLKKR HVCHNQPLEL SPNYGTYLLH RCSICRQLFT GFSYESKELR
501: IDVRCATVTE PFEHKSHQHP LHYSTDHSKR CSECDGDGKL SCDDCEFGLC FKCAILPQKV MRHRYDDHPL FLSYGEMGVA GKYWCEACET TVNPEKWFYT
601: CNECGITLHI SCVIDTYAYS MPGALTWIGT FVSNHSICRP LCCVCNSRCK LPFVRTLPED GADLYFCSLE CEKKIYQERF EF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)