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AT2G19560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : proteasome family protein
Curator
Summary (TAIR10)
encodes a protein with a PAM domain involved in ethylene signaling. eer5 mutants show ethylene hypersensitivity in relation to hypocotyl elongation. EER5 interacts with EIN2 and with COP9 in Y2H assays. EIN3 protein levels are the same in WT and eer5-1 mutants. EER5 may be involved in promoting a dampening of the ethylene response.
Computational
Description (TAIR10)
ENHANCED ETHYLENE RESPONSE 5 (EER5); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), PCI/PINT associated module (InterPro:IPR013143); Has 771 Blast hits to 770 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 260; Fungi - 323; Plants - 58; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Protein Annotations
DNASU:816475eggNOG:COG5600eggNOG:KOG2688EMBL:AC005917EMBL:AK118897EMBL:CP002685EnsemblPlants:AT2G19560
EnsemblPlants:AT2G19560.1entrez:816475GeneID:816475GO:GO:0005634GO:GO:0009723GO:GO:0009873GO:GO:0016973
GO:GO:0048364Gramene:AT2G19560.1hmmpanther:PTHR12732HOGENOM:HOG000243116IntAct:Q8GWE6InterPro:IPR000717iPTMnet:Q8GWE6
KEGG:ath:AT2G19560OMA:PIMYAVAPaxDb:Q8GWE6Pfam:PF01399PhylomeDB:Q8GWE6PIR:C84578PRIDE:Q9ZUN6
PRO:PR:Q8GWE6Proteomes:UP000006548RefSeq:NP_179546.2SMR:Q8GWE6STRING:3702.AT2G19560.1TAIR:AT2G19560tair10-symbols:EER5
UniGene:At.39825UniProt:Q8GWE6
Coordinates (TAIR10) chr2:-:8465924..8469069
Molecular Weight (calculated) 47617.00 Da
IEP (calculated) 9.63
GRAVY (calculated) -0.19
Length 413 amino acids
Sequence (TAIR10)
(BLAST)
001: MAYVSMGEAH RRITEYLNRF CDAVSYQDSS TLCRLLSFSS NSPPLLSLAD ALNVFQDSSS LIRQSDRFSE YGEILAHVFR SLQSYRVGNL VEAYLAFDKF
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)