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AT2G19470.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.969
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : casein kinase I-like 5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
casein kinase I-like 5 (ckl5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1); Has 70101 Blast hits to 69707 proteins in 2404 species: Archae - 48; Bacteria - 11303; Metazoa - 26265; Fungi - 7230; Plants - 12439; Viruses - 411; Other Eukaryotes - 12405 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G19470-MONOMEReggNOG:ENOG410XPGPeggNOG:KOG1164EMBL:AC005917
EMBL:AY086262EMBL:AY099837EMBL:AY943844EMBL:BT006580
EMBL:CP002685EnsemblPlants:AT2G19470EnsemblPlants:AT2G19470.1entrez:816466
GeneID:816466GO:GO:0004674GO:GO:0005524GO:GO:0005737
GO:GO:0016055GO:GO:0018105Gramene:AT2G19470.1hmmpanther:PTHR11909
hmmpanther:PTHR11909:SF154HOGENOM:HOG000182055InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT2G19470KO:K02218
OMA:SDNANYEPfam:PF00069Pfscan:PS50011PhylomeDB:Q9ZUP4
PIR:B84577PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_179537.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9ZUP4STRING:3702.AT2G19470.1SUPFAM:SSF56112
TAIR:AT2G19470tair10-symbols:ckl5UniGene:At.39838UniProt:Q9ZUP4
Coordinates (TAIR10) chr2:-:8433851..8436295
Molecular Weight (calculated) 48923.70 Da
IEP (calculated) 9.54
GRAVY (calculated) -0.71
Length 433 amino acids
Sequence (TAIR10)
(BLAST)
001: MEPRVGNKFR LGRKIGSGSF GEIYLGTDVQ TNEEVAIKLE SVKTAHPQLS YESRIYRVLQ GGTGIPNMKW YGVEGDYNVL VMDLLGPSLE DLFSYCKRQF
101: SLKTVLMLAD QMINRLEFIH SKSYLHRDIK PDNFLMGLGR RANQVYIIDY GLAKKYRDSS THRHIPYREN KSLIGTPRYA SLNTHLGIEQ SRRDDIESLG
201: YILMYFLKGS LPWQGLKAGN KKQKYDKISE KKVSTSIETL CRGHPTEFAS YFHYCRSLRF DDKPDYAYLK RLFRNLFIRE GFQFDFVFDW TVYKYQQSQS
301: GNPQPRPHDG GVGTSSGLNP AVGNSEKRPD VPNQRTNPDF TLKQKDKNGN DSAIAKDKLL PGSLNLGRSE GSSSRRVVDT SSREPFSGGS DNANYETALK
401: GIDGLRINNN AGDETAATPQ SNGDDVEPQS KAL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)