AT2G19190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FLG22-induced receptor-like kinase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Receptor-like protein kinase. Involved in early defense signaling. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
FLG22-induced receptor-like kinase 1 (FRK1); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response to bacterium; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sepal, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase protein (TAIR:AT4G29990.1); Has 158999 Blast hits to 129792 proteins in 4951 species: Archae - 135; Bacteria - 15029; Metazoa - 47296; Fungi - 11032; Plants - 64935; Viruses - 473; Other Eukaryotes - 20099 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:8326067..8329893 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98717.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 876 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAMLKSLSSI LFTSFALLFF LVHAQDQSGF ISIDCGIPDD SSYNDETTGI KYVSDSAFVD SGTTKRIAAQ FQSSGFDRHL LNVRSFPQSK RSCYDVPTPR 101: GKGFKYLIRT RFMYGNYDDL GRVPEFDLYL GVNFWDSVKL DDATTILNKE IITIPLLDNV QVCVVDKNAG TPFLSVLEIR LLLNTTYETP YDALTLLRRL 201: DYSKTGKLPS RYKDDIYDRI WTPRIVSSEY KILNTSLTVD QFLNNGYQPA STVMSTAETA RNESLYLTLS FRPPDPNAKF YVYMHFAEIE VLKSNQTREF 301: SIWLNEDVIS PSFKLRYLLT DTFVTPDPVS GITINFSLLQ PPGEFVLPPI INALEVYQVN EFLQIPTHPQ DVDAMRKIKA TYRVKKNWQG DPCVPVDYSW 401: EGIDCIQSDN TTNPRVVSLN ISFSELRGQI DPAFSNLTSI RKLDLSGNTL TGEIPAFLAN LPNLTELNVE GNKLTGIVPQ RLHERSKNGS LSLRFGRNPD 501: LCLSDSCSNT KKKNKNGYII PLVVVGIIVV LLTALALFRR FKKKQQRGTL GERNGPLKTA KRYFKYSEVV NITNNFERVI GKGGFGKVYH GVINGEQVAV 601: KVLSEESAQG YKEFRAEVDL LMRVHHTNLT SLVGYCNEIN HMVLIYEYMA NENLGDYLAG KRSFILSWEE RLKISLDAAQ GLEYLHNGCK PPIVHRDVKP 701: TNILLNEKLQ AKMADFGLSR SFSVEGSGQI STVVAGSIGY LDPEYYSTRQ MNEKSDVYSL GVVLLEVITG QPAIASSKTE KVHISDHVRS ILANGDIRGI 801: VDQRLRERYD VGSAWKMSEI ALACTEHTSA QRPTMSQVVM ELKQIVYGIV TDQENYDDST KMLTVNLDTE MVPRAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)