AT2G18360.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.985 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root, leaf; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36610.1); Has 8797 Blast hits to 8792 proteins in 1517 species: Archae - 89; Bacteria - 6094; Metazoa - 449; Fungi - 67; Plants - 445; Viruses - 0; Other Eukaryotes - 1653 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:7976848..7979221 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35528.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.91 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||
| Length | 313 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVNFVDLQKP LLYRLMKLAG VIPYTVELEP GTKMNFWIPK ETLKKTKKSD KNFAVEPQKP TKPVLLFIHG FAAEGIVTWQ FQVGSLAKKY SVYIPDLLFF 101: GGSYSDNADR SPAFQAHCLV KSLRILGIEK FTLVGFSYGG MVAFKIAEEY PEMVQAMVVS GSILAMTDTI SESNLNQLGF KSSADLLLPT SVKGLKTLFT 201: LAVHKPMWFP KRLFKDFIEV MITNRKERAE LLEALVISNK DVTIPRFQQK IHLLWGESDQ IFNLEFAKSM KEQLGENATM ESIKKAGHLA HLERPCVYNR 301: RLKKFLASVY SEN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)