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AT2G17650.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AMP-dependent synthetase and ligase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G17650-MONOMEREC:6.2.1.-eggNOG:COG0318eggNOG:KOG1176EMBL:AC007509EMBL:AF503761EMBL:AK118689
EMBL:BT005926EMBL:CP002685EnsemblPlants:AT2G17650EnsemblPlants:AT2G17650.1entrez:816272GeneID:816272Genevisible:Q9SEY5
GO:GO:0006631GO:GO:0016874Gramene:AT2G17650.1hmmpanther:PTHR24095hmmpanther:PTHR24095:SF176HOGENOM:HOG000230005InParanoid:Q9SEY5
InterPro:IPR000873InterPro:IPR020845InterPro:IPR025110iPTMnet:Q9SEY5KEGG:ath:AT2G17650OMA:MTHRNIWPaxDb:Q9SEY5
Pfam:PF00501Pfam:PF13193Pfam:Q9SEY5PhylomeDB:Q9SEY5PIR:G84554PIR:T08866PRIDE:Q9SEY5
PRO:PR:Q9SEY5PROSITE:PS00455ProteinModelPortal:Q9SEY5Proteomes:UP000006548RefSeq:NP_179356.1scanprosite:PS00455SMR:Q9SEY5
STRING:3702.AT2G17650.1SUPFAM:SSF56801TAIR:AT2G17650UniGene:At.40116UniProt:Q9SEY5
Coordinates (TAIR10) chr2:+:7671041..7672936
Molecular Weight (calculated) 67466.10 Da
IEP (calculated) 7.22
GRAVY (calculated) -0.20
Length 603 amino acids
Sequence (TAIR10)
(BLAST)
001: MRFLLTKRAF RIFNPRFQRL WLTSSPFSST SNSGGFPDDS EPESWRTIEG LLRSPANFSP LSPITFLERS AKVYRDRTSL VFGSVKHTWF QTYQRCLRLA
101: SALTNLGISR GDVVAALAPN VPAMHELHFA VPMAGLILCP LNTRLDPSTL SVLLAHSEAK ILFVDHQLLE IAHGALDLLA KSDKTRKSLK LVLISQSNDD
201: DDSDEDSSST FASKYSFDYE YETLLKSGDS EFEIIKPRCE WDPISINYTS GTTSRPKGVV YSHRGAYLNS LATVFLHQMS VYPVYLWTVP MFHCNGWCLV
301: WGVAAQGGTN ICLRKVSPKM IFKNIAMHKV THMGGAPTVL NMIVNYTVTE HKPLPHRVEI MTGGSPPLPQ ILAKMEELGF NVSHLYGLTE TYGPGTHCVW
401: KPEWDSLSLE ERTKLKARQG VQHLGLEGLD VKDPLTMETV PDDGLTMGEV MFRGNTVMSG YFKDIEATRK AFEGDWFHSG DLAVKYPDGY IEIKDRLKDV
501: IISGGENISS VEVERVLCSH QAVLEAAVVA RPDHHWGQTP CGFVKLKEGF DTIKPEEIIG FCRDHLPHYM APKTIVFGDI PKTSTGKVQK YLLRKKADEM
601: GSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)