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AT2G17040.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAC domain containing protein 36
Curator
Summary (TAIR10)
Member of the NAC transcription factor family and more specifically, the ONAC022 subfamily. Involved in leaf and inflorescence stem morphogenesis.
Computational
Description (TAIR10)
NAC domain containing protein 36 (NAC036); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 35 (TAIR:AT2G02450.2); Has 2865 Blast hits to 2857 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2863; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVEWeggNOG:ENOG410Y9QSEMBL:CP002685EnsemblPlants:AT2G17040EnsemblPlants:AT2G17040.1entrez:816209GeneID:816209
GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009965GO:GO:0010200GO:GO:0045792
GO:GO:0048281Gramene:AT2G17040.1hmmpanther:PTHR31989hmmpanther:PTHR31989:SF2InParanoid:F4IME8InterPro:IPR003441KEGG:ath:AT2G17040
ncoils:CoilOMA:KEENMMTPaxDb:F4IME8Pfam:PF02365Pfscan:PS51005PRIDE:F4IME8PROSITE:PS51005
ProteinModelPortal:F4IME8Proteomes:UP000006548RefSeq:NP_565404.2SMR:F4IME8STRING:3702.AT2G17040.1SUPFAM:SSF101941TAIR:AT2G17040
tair10-symbols:anac036tair10-symbols:NAC036UniGene:At.28710UniProt:F4IME8
Coordinates (TAIR10) chr2:+:7407123..7408120
Molecular Weight (calculated) 31819.30 Da
IEP (calculated) 9.25
GRAVY (calculated) -0.64
Length 276 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKDIELPGF RFHPTEEELL DFYLKNMVYG KRSSVEVIGF LNIYRHDPWD LPGLSRIGER EWYFFVPRER KHGNGGRPSR TTEKGYWKAT GSDRKIISLS
101: EPKRVIGLKK TLVFYRGRAP GGSKTDWVMN EFRMPDNCSL PKDVVLCKIY RKATSLKVLE QRAEMEAKMN QTCPNSPLSS SETISFVGKE ENMMTSFRAP
201: QVIAMEEANK IQMHQENAKT EEKQREAETK EPSSSLKLPF GSLPELQLPK PGVEWDQLLS ISPWLQNLTP IVNIYW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)