AT2G16890.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.530 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213), Tudor subgroup (InterPro:IPR018351); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G14860.1); Has 3273 Blast hits to 3253 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:7316938..7317876 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35188.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.44 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||
| Length | 312 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSVSTHHHHV VLFPFMSKGH IIPLLQFGRL LLRHHRKEPT ITVTVFTTPK NQPFISDFLS DTPEIKVISL PFPENITGIP PGVENTEKLP SMSLFVPFTR 101: ATKLLQPFFE ETLKTLPKVS FMVSDGFLWW TSESAAKFNI PRFVSYGMNS YSAAVSISVF KHELFTEPES KSDTEPVTVP DFPWIKVKKC DFDHGTTEPE 201: ESGAALELSM DQIKSTTTSH GFLVNSFYEL ESAFVDYNNN SGDKPKSWCV GPLCLTDPPK QGSAKPAWIH WLDQKREEGR PVLYVAFGTQ AEISNKQLME 301: LAFGLEDSKV RT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)