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AT2G16710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Iron-sulphur cluster biosynthesis family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Iron-sulphur cluster biosynthesis family protein; FUNCTIONS IN: iron-sulfur cluster binding, structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FeS cluster insertion, C-terminal, conserved site (InterPro:IPR017870), FeS cluster biogenesis (InterPro:IPR000361), FeS cluster insertion (InterPro:IPR016092); BEST Arabidopsis thaliana protein match is: Iron-sulphur cluster biosynthesis family protein (TAIR:AT2G36260.1); Has 10065 Blast hits to 10064 proteins in 1822 species: Archae - 41; Bacteria - 5829; Metazoa - 243; Fungi - 173; Plants - 169; Viruses - 0; Other Eukaryotes - 3610 (source: NCBI BLink).
Protein Annotations
BioGrid:1529eggNOG:COG0316eggNOG:KOG1120EMBL:AC005825EMBL:AY087119EMBL:BT004789EMBL:CP002685
EnsemblPlants:AT2G16710EnsemblPlants:AT2G16710.1entrez:816172ExpressionAtlas:Q8LBM4Gene3D:2.60.300.12GeneID:816172Genevisible:Q8LBM4
GO:GO:0005198GO:GO:0005739GO:GO:0016226GO:GO:0046872GO:GO:0051536hmmpanther:PTHR10072hmmpanther:PTHR10072:SF51
HOGENOM:HOG000228314InParanoid:Q8LBM4IntAct:Q8LBM4InterPro:IPR000361InterPro:IPR016092InterPro:IPR017870PaxDb:Q8LBM4
Pfam:PF01521Pfam:Q8LBM4PhylomeDB:Q8LBM4PIR:C84543PRIDE:Q8LBM4PRO:PR:Q8LBM4PROSITE:PS01152
ProteinModelPortal:Q8LBM4Proteomes:UP000006548RefSeq:NP_179262.1scanprosite:PS01152SMR:Q8LBM4STRING:3702.AT2G16710.3SUPFAM:SSF89360
SwissPalm:Q8LBM4TAIR:AT2G16710TIGRfam:TIGR00049TIGRFAMs:TIGR00049UniGene:At.40246UniProt:Q0WSL3UniProt:Q8LBM4
Coordinates (TAIR10) chr2:+:7248294..7250013
Molecular Weight (calculated) 14986.10 Da
IEP (calculated) 9.66
GRAVY (calculated) -0.26
Length 137 amino acids
Sequence (TAIR10)
(BLAST)
001: MKASQILAAA AARVGPALRK QVLTLTDEAA SRVHHLLQQR QKPFLRLGVK ARGCNGLSYT LNYADEKGKF DELVEEKGVR ILVEPKALMH VIGTKMDFVD
101: DKLRSEFVFI NPNSQGQCGC GESFMTTSTS SAKQSAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)