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AT2G16640.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22923678 (2012): plastid
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:16618929 (2006): unclear
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : multimeric translocon complex in the outer envelope membrane 132
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
multimeric translocon complex in the outer envelope membrane 132 (TOC132); FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chloroplast protein import component Toc86/159 (InterPro:IPR005690), AIG1 (InterPro:IPR006703); BEST Arabidopsis thaliana protein match is: translocon outer complex protein 120 (TAIR:AT3G16620.1); Has 7054 Blast hits to 4909 proteins in 545 species: Archae - 31; Bacteria - 596; Metazoa - 2433; Fungi - 793; Plants - 579; Viruses - 84; Other Eukaryotes - 2538 (source: NCBI BLink).
Protein Annotations
BioGrid:1522DisProt:DP00610EC:3.6.5.-eggNOG:ENOG410IJABeggNOG:ENOG410XR0MEMBL:AC005825EMBL:AK222043
EMBL:AY099660EMBL:CP002685EnsemblPlants:AT2G16640EnsemblPlants:AT2G16640.1entrez:816165Gene3D:3.40.50.300GeneID:816165
Genevisible:Q9SLF3GO:GO:0004888GO:GO:0005525GO:GO:0007165GO:GO:0009536GO:GO:0009707GO:GO:0015031
GO:GO:0016020GO:GO:0016021GO:GO:0016817GO:GO:0046872Gramene:AT2G16640.1hmmpanther:PTHR10903hmmpanther:PTHR10903:SF47
HOGENOM:HOG000243570InParanoid:Q9SLF3IntAct:Q9SLF3InterPro:IPR005690InterPro:IPR006703InterPro:IPR024283InterPro:IPR027417
iPTMnet:Q9SLF3KEGG:ath:AT2G16640OMA:DDTRLDTPaxDb:Q9SLF3Pfam:PF04548Pfam:PF11886Pfam:Q9SLF3
Pfscan:PS51720PhylomeDB:Q9SLF3PIR:D84542PRIDE:Q9SLF3PRO:PR:Q9SLF3PROSITE:PS51720ProteinModelPortal:Q9SLF3
Proteomes:UP000006548RefSeq:NP_179255.1SMR:Q9SLF3STRING:3702.AT2G16640.1SUPFAM:SSF52540TAIR:AT2G16640tair10-symbols:ATTOC132
tair10-symbols:TOC132TIGRfam:TIGR00993TIGRFAMs:TIGR00993UniGene:At.21953UniGene:At.67099UniProt:Q9SLF3
Coordinates (TAIR10) chr2:-:7211489..7215109
Molecular Weight (calculated) 132284.00 Da
IEP (calculated) 4.48
GRAVY (calculated) -0.67
Length 1206 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)