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AT2G16580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G34760.1); Has 1242 Blast hits to 1227 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1241; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYW1eggNOG:ENOG410Z28UEMBL:AC007195EMBL:CP002685EnsemblPlants:AT2G16580EnsemblPlants:AT2G16580.1entrez:816158
GeneID:816158GO:GO:0009733Gramene:AT2G16580.1hmmpanther:PTHR31374hmmpanther:PTHR31374:SF35HOGENOM:HOG000238628InterPro:IPR003676
KEGG:ath:AT2G16580KO:K14488OMA:YVGHNRSPfam:PF02519PhylomeDB:Q9SI60PIR:F84541Proteomes:UP000006548
RefSeq:NP_179248.1STRING:3702.AT2G16580.1TAIR:AT2G16580UniGene:At.40260UniGene:At.64331UniProt:Q9SI60
Coordinates (TAIR10) chr2:-:7186602..7186928
Molecular Weight (calculated) 12296.00 Da
IEP (calculated) 8.07
GRAVY (calculated) -0.20
Length 108 amino acids
Sequence (TAIR10)
(BLAST)
001: MSILKKSTKL AQTAMLRQIL KRCSSLGKKN GGGGYEEVDL PLDVPKGHFP VYVGHNRSRY IVPISFLTNL DFQCLLRRAE EEFGFDHDMG LTIPCDELFF
101: QDLTSMIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)