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AT2G15670.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT3G51670.1); Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC006248EMBL:CP002685EnsemblPlants:AT2G15670EnsemblPlants:AT2G15670.1
entrez:816060GeneID:816060GO:GO:0016021Gramene:AT2G15670.1
KEGG:ath:AT2G15670PIR:H84531Proteomes:UP000006548RefSeq:NP_179169.1
TAIR:AT2G15670TMHMM:TMhelixUniGene:At.52754UniProt:Q9ZQE7
Coordinates (TAIR10) chr2:+:6828133..6829621
Molecular Weight (calculated) 22157.70 Da
IEP (calculated) 9.76
GRAVY (calculated) -0.43
Length 193 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKPLTGETI RVVFEEESEK QGGKESYMRK NKHRRVGKYS KFLYTSKRKY SKFQDISVIE QVGNTERHAR VLKTPGSVQT LYCWDGMRVN VQLYVVESSN
101: VLSTPIVVFK STSQVLPIPD SQNKEQVCDV QRRQCSHTDS QNGLPKPASE FSIKGGEKVN ILYGGLSPLE MLLCSHLFFF FNNFYVLMFF YGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)