AT2G15500.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.750 What is SUBAcon? |
|
||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||
| Description (TAIR10) | protein_coding : RNA-binding protein | ||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||
| Computational Description (TAIR10) |
RNA-binding protein; BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 110 Blast hits to 110 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 13; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:6763707..6764751 | ||||||||||||||||||||
| Molecular Weight (calculated) | 14772.00 Da | ||||||||||||||||||||
| IEP (calculated) | 9.84 | ||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||
| Length | 132 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSKLIGMLLN DKQVYVGPFL RGKKGILLAV ESLKGNTFDD KQWVVDRAQK KSEREMELKV PYEQSLKEIA DKFQSYNFRG SGFVAFSTQN VTISGICKDV 101: IDESVAMPPS VGPRMPIYPL GSPGIRKSMF YG |
||||||||||||||||||||
| See Also |
|
||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)