AT2G15390.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 ASURE: golgi What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : fucosyltransferase 4 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1. | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
fucosyltransferase 4 (FUT4); FUNCTIONS IN: transferase activity, transferring glycosyl groups, fucosyltransferase activity; INVOLVED IN: cell wall biogenesis; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan fucosyltransferase (InterPro:IPR004938); BEST Arabidopsis thaliana protein match is: fucosyltransferase 5 (TAIR:AT2G15370.1); Has 339 Blast hits to 330 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 332; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:6709345..6710856 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58059.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.39 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||||||
| Length | 503 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFCHSLLAQR ILLLTFFFVI CSDESETPGR DRLIGGLLTA DFDEGSCLSR YHKTFLYRKP SPYKPSEYLV SKLRSYEMLH KRCGPGTKAY KEATKHLSHD 101: ENYNASKSDG ECRYVVWLAD YGLGNRLLTL ASVFLYALLT DRIILVDNRK DIGDLLCEPF PGTSWLLPLD FPLMKYADGY HKGYSRCYGT MLENHSINST 201: SFPPHLYMHN LHDSRDSDKM FFCQKDQSLI DKVPWLIFRA NVYFVPSLWF NPTFQTELTK LFPQKETVFH HLGRYLFHPK NQVWDIVTKY YHDHLSKADE 301: RLGIQIRVFR DQGGYYQHVM DQVISCTQRE KLLPELATQE ESKVNISNIP KSKAVLVTSL SPEYSKKLEN MFSERANMTG EIIKVYQPSG ERYQQTDKKV 401: HDQKALAEMY LLSLTDNIVA SSRSTFGYVA YSLGGLKPWL LYLPNDNKAP DPPCVRSTSM EPCFLTPPTH GCEPDAWGTE SGKVVPFVRY CEDIWGLKLF 501: DEL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)