AT2G15080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.941 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 19 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 19 (RLP19); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 53 (TAIR:AT5G27060.1); Has 148554 Blast hits to 34281 proteins in 1300 species: Archae - 57; Bacteria - 11858; Metazoa - 32168; Fungi - 1631; Plants - 90272; Viruses - 42; Other Eukaryotes - 12526 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:6533764..6536715 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 109414.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.48 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 983 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMKGYITLSF LIILIFNFLD EFAASTRHLC DPDQSDAILE FKNEFETLEE SCFDSNIPLK TESWTNNSDC CYWDGIKCDA KFGDVIELDL SFSCLRGQLN 101: SNSSLFRLPQ LRFLTTLDLS NNDFIGQIPS SLETLSNLTT LDLSRNHFSG RIPSSIGNLS HLIFVDFSHN NFSGQIPSSL GYLSHLTSFN LSYNNFSGRV 201: PSSIGNLSYL TTLRLSRNSF FGELPSSLGS LFHLTDLILD TNHFVGKIPS SLGNLSHLTS IDLHKNNFVG EIPFSLGNLS CLTSFILSDN NIVGEIPSSF 301: GNLNQLDILN VKSNKLSGSF PIALLNLRKL STLSLFNNRL TGTLPSNMSS LSNLKLFDAT ENHFTGPLPS SLFNIPSLKT ITLENNQLNG SLGFGNISSY 401: SNLTVLRLGN NNFRGPIHRS ISKLVNLKEL DLSNYNTQGL VDFTIFSHLK SIEYLNLSHL NTTTTIDMYE ILSSFKLLDT LDLSGSHVST TNKSSLSNSS 501: LVLISQLYLS GCGITEFPKF LRSQELMLTL DISNNKIKGQ VPGWLWMLPV LNYVNLSNNT FIGFERSTKL GLTSIQEPPA MRQLFCSNNN FTGNIPSFIC 601: ELPYLSTLDF SNNKFNGSIP TCMGNIQSPY LQALNLRHNR LSGLLPENIF ESLISLDVGH NQLVGKLPRS LSHISSLGLL NVESNKISDT FPLWLSSLQE 701: LQVLVLRSNA FYGPIEKTQF SKLRIIDISG NQFNGTLPAN FFVNWTAMFS LDENEDQSNG ETMSNMYMST DYFYFDSMVL MNKGVEMELE RVLKVFTVID 801: FSGNKFEGEI PKSIGLLKEL HVLNLSNNAL SGHIASSMGN LMALESLDVS QNKLSGEIPQ ELGKLTYLAY MNFSHNQLVG LLPGGTQFQT QKCSSFEDNH 901: GLYGPSLEKI CDIHGKTPQQ SDMAPEPEED EEEVISWIAA VIGFILGTAL GLTFGCILFS YKPDWFKNPF VRDKRRNIGT ITH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)