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AT2G14960.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.964
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Auxin-responsive GH3 family protein
Curator
Summary (TAIR10)
encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.
Computational
Description (TAIR10)
GH3.1; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT4G37390.1); Has 1628 Blast hits to 1412 proteins in 230 species: Archae - 1; Bacteria - 595; Metazoa - 55; Fungi - 2; Plants - 676; Viruses - 0; Other Eukaryotes - 299 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-821-MONOMEREC:6.3.2.-eggNOG:ENOG410IJ43eggNOG:ENOG410XQH0EMBL:AC005396EMBL:CP002685EnsemblPlants:AT2G14960
EnsemblPlants:AT2G14960.1entrez:815985GeneID:815985Genevisible:O82333GO:GO:0009733GO:GO:0016874Gramene:AT2G14960.1
hmmpanther:PTHR31901hmmpanther:PTHR31901:SF4HOGENOM:HOG000238302InParanoid:O82333InterPro:IPR004993KEGG:00220+6.3.2.-KEGG:00261+6.3.2.-
KEGG:00380+6.3.2.-KEGG:ath:AT2G14960KO:K14487OMA:RICHNELPANTHER:PTHR31901PaxDb:O82333Pfam:O82333
Pfam:PF03321PhylomeDB:O82333PIR:D84523PRIDE:O82333PRO:PR:O82333ProteinModelPortal:O82333Proteomes:UP000006548
RefSeq:NP_179101.1SMR:O82333STRING:3702.AT2G14960.1TAIR:AT2G14960tair10-symbols:GH3.1UniGene:At.40477UniProt:O82333
Coordinates (TAIR10) chr2:-:6451659..6453670
Molecular Weight (calculated) 66738.00 Da
IEP (calculated) 6.30
GRAVY (calculated) -0.24
Length 590 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVDSNLSSP LGPPACEKDA KALRFIEEMT RNADTVQENL LAEILARNAD TEYLRRFNLC GATDRDTFKT KIPVITYEDL QPEIQRIADG DRSPILSAHP
101: ISEFLTSSGT SAGERKLMPT IKEELDRRQL LYSLLMPVMN LYVPGLDKGK GMYFLFVKSE TKTPGGLPAR PVLTSYYKSE HFRSRPYDPY NVYTSPNEAI
201: LCPDSFQSMY TQMLCGLLDR LSVLRVGAVF ASGLLRAIRF LQLHWSRFAH DIELGCLDSE ITDPSIRQCM SGILKPDPVL AEFIRRECKS DNWEKIITRI
301: WPNTKYLDVI VTGAMAQYIP TLEYYSGGLP MACTMYASSE CYFGLNLNPM SKPSEVSYTI MPNMAYFEFI PLGGTKAVEL VDVNIGKEYE LVVTTYAGLC
401: RYRVGDILRV TGFHNSAPQF HFVRRKNVLL SIDSDKTDES ELQKAVENAS SILHEECGSR VAEYTSYADT STIPGHYVLY WELLVRDGAR QPSHETLTRC
501: CLGMEESLNS VYRQSRVADN SVGPLEIRVV RNGTFEELMD YAISRGASIN QYKVPRCVNF TPIVELLDSR VVSAHFSPSL PHWTPERRRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)