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AT2G14890.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : arabinogalactan protein 9
Curator
Summary (TAIR10)
putative proline-rich protein (At2g14890) mRNA, complete
Computational
Description (TAIR10)
arabinogalactan protein 9 (AGP9); Has 285298 Blast hits to 106417 proteins in 3252 species: Archae - 851; Bacteria - 74147; Metazoa - 98199; Fungi - 38441; Plants - 27968; Viruses - 7387; Other Eukaryotes - 38305 (source: NCBI BLink).
Protein Annotations
BioGrid:1337EMBL:AC005396EMBL:AF195890EMBL:AF324669EMBL:AF326868EMBL:AF339690EMBL:AY078968
EMBL:AY125554EMBL:CP002685EnsemblPlants:AT2G14890EnsemblPlants:AT2G14890.1entrez:815978ExpressionAtlas:Q9C5S0GeneID:815978
Genevisible:Q9C5S0GO:GO:0005886GO:GO:0031225InParanoid:Q9C5S0KEGG:ath:AT2G14890OMA:MSGVEKMPaxDb:Q9C5S0
Pfam:Q9C5S0PIR:F84522PRO:PR:Q9C5S0ProteinModelPortal:Q9C5S0Proteomes:UP000006548RefSeq:NP_179095.1STRING:3702.AT2G14890.1
TAIR:AT2G14890tair10-symbols:AGP9UniGene:At.24946UniGene:At.46848UniGene:At.67061UniGene:At.67739UniProt:Q9C5S0
Coordinates (TAIR10) chr2:+:6399679..6400755
Molecular Weight (calculated) 18416.90 Da
IEP (calculated) 4.16
GRAVY (calculated) -0.09
Length 191 amino acids
Sequence (TAIR10)
(BLAST)
001: MARSFAIAVI CIVLIAGVTG QAPTSPPTAT PAPPTPTTPP PAATPPPVSA PPPVTTSPPP VTTAPPPANP PPPVSSPPPA SPPPATPPPV ASPPPPVASP
101: PPATPPPVAT PPPAPLASPP AQVPAPAPTT KPDSPSPSPS SSPPLPSSDA PGPSTDSISP APSPTDVNDQ NGASKMVSSL VFGSVLVWFM I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)