suba logo
AT2G14540.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.973
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : serpin 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
serpin 2 (SRP2); FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: DNA repair, response to DNA damage stimulus; LOCATED IN: nucleus; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT1G62170.1); Has 6246 Blast hits to 6203 proteins in 468 species: Archae - 66; Bacteria - 371; Metazoa - 4782; Fungi - 10; Plants - 340; Viruses - 461; Other Eukaryotes - 216 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4826eggNOG:KOG2392EMBL:AC006067EMBL:AY072119
EMBL:AY122942EMBL:CP002685EnsemblPlants:AT2G14540EnsemblPlants:AT2G14540.1
entrez:815941GeneID:815941Genevisible:Q9ZQR6GO:GO:0004867
GO:GO:0005615GO:GO:0005634GO:GO:0006281GO:GO:0006974
GO:GO:0010951Gramene:AT2G14540.1hmmpanther:PTHR11461hmmpanther:PTHR11461:SF171
HOGENOM:HOG000238520InParanoid:Q9ZQR6InterPro:IPR000215InterPro:IPR023795
InterPro:IPR023796iPTMnet:Q9ZQR6KEGG:ath:AT2G14540KO:K13963
OMA:WENIFDEPANTHER:PTHR11461PaxDb:Q9ZQR6Pfam:PF00079
Pfam:Q9ZQR6PhylomeDB:Q9ZQR6PIR:D84518PRIDE:Q9ZQR6
PRO:PR:Q9ZQR6PROSITE:PS00284ProteinModelPortal:Q9ZQR6Proteomes:UP000006548
Reactome:R-ATH-114608RefSeq:NP_179060.1scanprosite:PS00284SMART:SM00093
SMR:Q9ZQR6STRING:3702.AT2G14540.1SUPFAM:SSF56574TAIR:AT2G14540
tair10-symbols:ATSRP2tair10-symbols:SRP2UniGene:At.40532UniProt:Q9ZQR6
Coordinates (TAIR10) chr2:-:6197922..6199390
Molecular Weight (calculated) 45889.30 Da
IEP (calculated) 5.74
GRAVY (calculated) -0.33
Length 407 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSKRKNQEL STSETADPSL SKTNKKQKID MQEAMKNQNE VSLLLVGKVI SAVAKNSNCV FSPASINAVL TVTAANTDNK TLRSFILSFL KSSSTEETNA
101: IFHELASVVF KDGSETGGPK IAAVNGVWME QSLSCNPDWE DLFLNFFKAS FAKVDFRHKA EEVRLDVNTW ASRHTNDLIK EILPRGSVTS LTNWIYGNAL
201: YFKGAWEKAF DKSMTRDKPF HLLNGKSVSV PFMRSYEKQF IEAYDGFKVL RLPYRQGRDD TNREFSMYLY LPDKKGELDN LLERITSNPG FLDSHIPEYR
301: VDVGDFRIPK FKIEFGFEAS SVFNDFELNV SLHQKALIEI DEEGTEAAAA TTVVVVTGSC LWEPKKKIDF VADHPFLFLI REDKTGTLLF AGQIFDPSEL
401: SSALDRA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)