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AT2G13360.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : alanine:glyoxylate aminotransferase
Curator
Summary (TAIR10)
Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.
Computational
Description (TAIR10)
alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-508-MONOMERBioCyc:MetaCyc:AT2G13360-MONOMERBioGrid:1183BRENDA:2.6.1.44BRENDA:2.6.1.45EC:2.6.1.-EC:2.6.1.44
EC:2.6.1.45EC:2.6.1.51eggNOG:COG0075eggNOG:KOG2862EMBL:AB048945EMBL:AC007209EMBL:AF063901
EMBL:AK221418EMBL:AY096498EMBL:AY114010EMBL:CP002685EnsemblPlants:AT2G13360EnsemblPlants:AT2G13360.1EnsemblPlants:AT2G13360.2
entrez:815822Gene3D:3.40.640.10Gene3D:3.90.1150.10GeneID:815822Genevisible:Q56YA5GO:GO:0004760GO:GO:0005777
GO:GO:0005886GO:GO:0008453GO:GO:0009507GO:GO:0009570GO:GO:0009853GO:GO:0016020GO:GO:0048046
GO:GO:0050281Gramene:AT2G13360.1Gramene:AT2G13360.2gramene_pathway:2.6.1.45gramene_pathway:GLYSYN2-PWYgramene_pathway:PWY-181hmmpanther:PTHR21152
hmmpanther:PTHR21152:SF21HOGENOM:HOG000171814InParanoid:Q56YA5IntAct:Q56YA5InterPro:IPR000192InterPro:IPR015421InterPro:IPR015422
InterPro:IPR015424InterPro:IPR020578InterPro:IPR024169iPTMnet:Q56YA5KEGG:00440+2.6.1.37KEGG:ath:AT2G13360KO:K00830
OMA:FIAMMDEPaxDb:Q56YA5Pfam:PF00266Pfam:Q56YA5PhylomeDB:Q56YA5PIR:T52250PIRSF:PIRSF000524
PRIDE:Q56YA5PRO:PR:Q56YA5PROSITE:PS00595ProteinModelPortal:Q56YA5Proteomes:UP000006548Reactome:R-ATH-389661RefSeq:NP_178969.1
RefSeq:NP_849951.1SABIO-RK:Q56YA5scanprosite:PS00595SMR:Q56YA5STRING:3702.AT2G13360.1SUPFAM:SSF53383TAIR:AT2G13360
tair10-symbols:AGTtair10-symbols:AGT1tair10-symbols:SGATUniGene:At.24853UniProt:Q56YA5
Coordinates (TAIR10) chr2:-:5539417..5540902
Molecular Weight (calculated) 44210.50 Da
IEP (calculated) 7.95
GRAVY (calculated) 0.02
Length 401 amino acids
Sequence (TAIR10)
(BLAST)
001: MDYMYGPGRH HLFVPGPVNI PEPVIRAMNR NNEDYRSPAI PALTKTLLED VKKIFKTTSG TPFLFPTTGT GAWESALTNT LSPGDRIVSF LIGQFSLLWI
101: DQQKRLNFNV DVVESDWGQG ANLQVLASKL SQDENHTIKA ICIVHNETAT GVTNDISAVR TLLDHYKHPA LLLVDGVSSI CALDFRMDEW GVDVALTGSQ
201: KALSLPTGLG IVCASPKALE ATKTSKSLKV FFDWNDYLKF YKLGTYWPYT PSIQLLYGLR AALDLIFEEG LENIIARHAR LGKATRLAVE AWGLKNCTQK
301: EEWISNTVTA VMVPPHIDGS EIVRRAWQRY NLSLGLGLNK VAGKVFRIGH LGNVNELQLL GCLAGVEMIL KDVGYPVVMG SGVAAASTYL QHHIPLIPSR
401: I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)