AT2G12400.1::SUBA5

AT2G12400.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plasma membrane 1.000
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31975158 (2020): plastid PMID:30447334 (2019): plasma membrane PMID:28865150 (2017): extracellular region plant-type cell wall PMID:21533090 (2011): extracellular region plant-type cell wall PMID:21531424 (2011): plastid PMID:21433285 (2011): plasma membrane PMID:19334764 (2009): plasma membrane PMID:14517339 (2003): plasma membrane	PMID:24833385 (2014): AT4G14690.1:None: PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT1G11940.1:None: PMID:24833385 (2014): AT2G41705.1:None: PMID:24833385 (2014): AT1G17280.1:None: PMID:24833385 (2014): AT3G17000.1:None: PMID:24833385 (2014): AT1G08430.1:None: PMID:24833385 (2014): AT4G37680.1:None: PMID:24833385 (2014): AT4G30850.1:None: PMID:24833385 (2014): AT4G37370.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT5G06320.1:None: PMID:24833385 (2014): AT5G52420.1:None: PMID:24833385 (2014): AT3G13175.1:None: PMID:24833385 (2014): AT1G47640.1:None: PMID:24833385 (2014): AT4G14455.1:None: PMID:24833385 (2014): AT5G49540.1:None: PMID:24833385 (2014): AT2G22425.1:None: PMID:24833385 (2014): AT3G66654.1:None:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT1G30360.1 plasma membrane [4.69]
AT5G43880.1 cytosol, nucleus [4.63]
AT3G11420.1 vacuole [4.45]
AT5G16910.1 plasma membrane [4.33]
AT1G13560.1 vacuole [4.29]
AT1G79460.1 plastid [4.23]
AT3G51550.1 plasma membrane [4.19]
AT1G74380.1 golgi [4.17]
AT4G02600.1 plasma membrane [4.01]
AT4G27720.1 golgi [3.96]

AT3G17000.1 endoplasmic reticulum
AT5G52420.1 endoplasmic reticulum
AT4G37370.1 endoplasmic reticulum
AT3G13175.1 endoplasmic reticulum
AT3G12180.1 endoplasmic reticulum
AT2G22425.1 endoplasmic reticulum
AT1G47640.1 endoplasmic reticulum
AT3G66654.1 golgi
AT4G14455.1 golgi
AT4G30850.1 golgi
AT1G17280.1 golgi
AT4G37680.1 golgi
AT1G11940.1 golgi
AT2G26180.1 nucleus
AT2G41705.1 plasma membrane
AT5G06320.1 plasma membrane
AT4G14690.1 plastid
AT5G49540.1 vacuole
AT1G08430.1 endoplasmic reticulum, vacuole

Description (TAIR10)

protein_coding :

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IKWY	eggNOG:ENOG410Y00J	EMBL:BT002043	EMBL:CP002685
EnsemblPlants:AT2G12400	EnsemblPlants:AT2G12400.1	entrez:815712	GeneID:815712
GO:GO:0009506	GO:GO:0016021	Gramene:AT2G12400.1	hmmpanther:PTHR31414
hmmpanther:PTHR31414:SF1	HOGENOM:HOG000239584	KEGG:ath:AT2G12400	OMA:RPLYYNQ
PhylomeDB:Q8H0U2	Proteomes:UP000006548	RefSeq:NP_178935.2	TAIR:AT2G12400
TMHMM:TMhelix	UniGene:At.14383	UniProt:Q8H0U2

Coordinates (TAIR10)

chr2:-:5005144..5008140

Molecular Weight (calculated)

60283.00 Da

IEP (calculated)

7.51

GRAVY (calculated)

0.24

Length

541 amino acids

Sequence (TAIR10)
(BLAST)

001: MLCFRSQRVF ILVSLCLLSS FLVVVTGTTS ITGVGNEEER GVEEEWRTSV IERVIAEESG ENSSLILAAK RTRRKDPADN FKLYTGGWNI SNSHYLTSVG
101: YTAAPFIIIA LVWFVFFGLS LSLICLCYCC CARQSYGYSR VAYALSLILL ISFTIAAIIG CVFLYTGQGK FHASTTDTLD YVVSQANLTS ENLRNVSDYL
201: NAAKKVDVQS SILPQDVLSS IDNIQGKINS SATTLSVKTM ENQDKIQNVL DIMRLALVII AAVMLFLAFI GFLLSIFGLQ CLVYTLVILG WILVTVTFVL
301: CGGFLLLHNV VGDTCVAMDQ WVQNPTAHTA LDDILPCVDN ATARETLTRT KLVTYQLVNL LDNAISNMTN RNFPPQFRPL YYNQSGPLMP LLCNPFNADL
401: SDRQCQPGQV HLNNATEVWK NFTCQIVTPG TCSTPGRLTP KLYSQMAAAV NVSYGLYKYG PFLADLQGCD FVRSTFTDIE RDHCPGLKRY TQWIYVGLVV
501: VSASVMSSLV FWVIYARERR HRVYTKDYNA MHSEDPRSKG H